RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 IL17RCQ8NAC3 791 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SH3RF3Q8TEJ3 882 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SLC20A1Q8WUM9 679 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 DYDC1Q8WWB3 177 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 HDAC2Q92769 488 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 STAMQ92783 540 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 MCUR1Q96AQ8 359 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 E2F7Q96AV8 911 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 HHIPQ96QV1 700 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SRPK1Q96SB4 655 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SLA2Q9H6Q3 261 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CYP26B1Q9NR63 512 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 PAK5Q9P286 719 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 AP3M1Q9Y2T2 418 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 GRIP1Q9Y3R0 1128 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 PCDHGA3Q9Y5H0 932 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 POTEMA6NI47 508 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CLDN24A6NM45 220 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 MSH4O15457 936 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SMAD6O43541 496 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 UGT2B11O75310 529 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 STAM2O75886 525 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CLPXO76031 633 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 FARP2O94887 1054 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 P4HBP07237 508 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 PDHA1P08559 390 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 KRT7P08729 469 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 PABPC1P11940 636 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 COX4I1P13073 169 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 ENDOUP21128 410 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 RAP1GAPP47736 663 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 YWHAZP63104 245 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 ZNF200P98182 395 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 PRKCDQ05655 676 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 BST1Q10588 318 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 KRR1Q13601 381 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 COG2Q14746 738 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 EFTUD2Q15029 972 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 RGS21Q2M5E4 152 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 MMEL1Q495T6 779 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 BRDTQ58F21 947 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SLC2A7Q6PXP3 512 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 DNAJC14Q6Y2X3 702 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 FBXO11Q86XK2 927 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 RIMKLAQ8IXN7 391 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SYCP3Q8IZU3 236 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CENPSQ8N2Z9 138 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 XXYLT1Q8NBI6 393 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 GSDMBQ8TAX9 411 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 BPIFB1Q8TDL5 484 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SDR42E1Q8WUS8 393 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SEPT8Q92599 483 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 GPKOWQ92917 476 aaPredicted RBP eCLIP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 GPRASP2Q96D09 838 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 ZC3HAV1LQ96H79 300 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 RNF170Q96K19 258 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CCDC85AQ96PX6 553 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 EIF2AK1Q9BQI3 630 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 ZKSCAN3Q9BRR0 538 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 ZNF670Q9BS34 389 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 NUF2Q9BZD4 464 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 INTS10Q9NVR2 710 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 RRN3Q9NYV6 651 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 PKD2L1Q9P0L9 805 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 OSGIN1Q9UJX0 560 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 STAP1Q9ULZ2 295 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SNX7Q9UNH6 387 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 STK38LQ9Y2H1 464 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 TIMM22Q9Y584 194 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 PCDHGB3Q9Y5G1 929 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 UBIAD1Q9Y5Z9 338 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SERTM1A2A2V5 107 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 G3V2L1 256 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 HTRA2O43464 458 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 NDUFA2O43678 99 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 TBC1D4O60343 1298 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 LPXNO60711 386 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 MTRF1O75570 445 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 APOEP02649 317 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CKMT1AP12532 417 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 NAGAP17050 411 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CHMP24386 653 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 POLD1P28340 1107 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SHMT1P34896 483 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 DDOSTP39656 456 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 RPS5P46782 204 aaKnown RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CASP4P49662 377 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 BCAMP50895 628 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 AP2S1P53680 142 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 POLE2P56282 527 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 IFITM2Q01629 132 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 POU5F1BQ06416 359 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 NFATC3Q12968 1075 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 MAPRE2Q15555 327 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 DLG2Q15700 870 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 HMBOX1Q6NT76 420 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SPATC1Q76KD6 591 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 SLC51BQ86UW2 128 aa4.62□□□□□ -1.67
PTPN22-201ENST00000359785 IFNLR1Q8IU57 520 aaPredicted RBP4.62□□□□□ -1.67
PTPN22-201ENST00000359785 CRLF3Q8IUI8 442 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms