RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 IL27RAQ6UWB1 636 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 ENKURQ8TC29 256 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 HGH1Q9BTY7 390 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 KIFC1Q9BW19 673 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 CCDC167Q9P0B6 97 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 SIK3Q9Y2K2 1263 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 CNTNAP4Q9C0A0 1308 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 VAPBO95292 243 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 CYP2A6P11509 494 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 JAK1P23458 1154 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 IRAK1BP1Q5VVH5 260 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 RNF44Q7L0R7 432 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 ERO1BQ86YB8 467 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 RMND5BQ96G75 393 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 MYLK2Q9H1R3 596 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 CDHR5Q9HBB8 845 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 ARHGAP20Q9P2F6 1191 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 CHKBQ9Y259 395 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 NEXMIFQ5QGS0 1516 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 MTA2O94776 668 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 ARRDC4Q8NCT1 418 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 OMA1Q96E52 524 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 UGT2B28Q9BY64 529 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 FBXO44Q9H4M3 255 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 ZDHHC6Q9H6R6 413 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 DDX18Q9NVP1 670 aaKnown RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 ZMYND8Q9ULU4 1186 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 CRYL1Q9Y2S2 319 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 RGS14O43566 566 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 TBC1D12O60347 775 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 IGSF6O95976 241 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 RFX5P48382 616 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 EIF2B2P49770 351 aaKnown RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 TRMT5Q32P41 509 aaKnown RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 SYT12Q8IV01 421 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 C4orf19Q8IY42 314 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 APBB2Q92870 758 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 TAS2R13Q9NYV9 303 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 ETS1P14921 441 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 PTENP60484 403 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 TRAF3Q13114 568 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 SLC39A12Q504Y0 691 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 AKIRIN2Q53H80 203 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 STK32CQ86UX6 486 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 METTL6Q8TCB7 284 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 MARK4Q96L34 752 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 ARMCX1Q9P291 453 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 A0A096LPK6 155 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 PQBP1O60828 265 aaKnown RBP18.71■□□□□ 0.59
SHANK1-202ENST00000359082 SSTR1P30872 391 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 PLK1P53350 603 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 CBWD6Q4V339 395 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 TXNRD3Q86VQ6 643 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 A0A087X1B8 175 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 FCHO1O14526 889 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 LDLRP01130 860 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 NFIAQ12857 509 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 CLVS1Q8IUQ0 354 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-202ENST00000359082 ITFG1Q8TB96 612 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 RPRD1BQ9NQG5 326 aaKnown RBP18.71■□□□□ 0.59
SHANK1-202ENST00000359082 CNGB3Q9NQW8 809 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 H3BQF6 201 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 GP5P40197 560 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 PURAQ00577 322 aaKnown RBP18.71■□□□□ 0.59
SHANK1-202ENST00000359082 C1QBPQ07021 282 aaKnown RBP18.71■□□□□ 0.59
SHANK1-202ENST00000359082 FAM126BQ8IXS8 530 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 CAVIN3Q969G5 261 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 USP20Q9Y2K6 914 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 PCDHA3Q9Y5H8 950 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 BCORL1Q5H9F3 1711 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 CLOCKO15516 846 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 OR6B1O95007 311 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 FGRP09769 529 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 USP17L7P0C7H9 530 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 COX7A2P14406 83 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 RALGDSQ12967 914 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 CDC73Q6P1J9 531 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 SV2AQ7L0J3 742 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 THAP1Q9NVV9 213 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 NINJ2Q9NZG7 142 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 INVSQ9Y283 1065 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 STARD13Q9Y3M8 1113 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
SHANK1-202ENST00000359082 PROX1Q92786 737 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 SEMA4BQ9NPR2 832 aaPredicted RBP18.7■□□□□ 0.58
SHANK1-202ENST00000359082 STK39Q9UEW8 545 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.7■□□□□ 0.58
SHANK1-202ENST00000359082 LACTBL1A8MY62 500 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 PPP4CP60510 307 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 TCEA2Q15560 299 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 CNGA2Q16280 664 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.7■□□□□ 0.58
SHANK1-202ENST00000359082 TMPRSS6Q8IU80 811 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 MCOLN3Q8TDD5 553 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 PAIP1Q9H074 479 aaKnown RBP18.7■□□□□ 0.58
SHANK1-202ENST00000359082 FAM205AQ6ZU69 1335 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 GJB6O95452 261 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 IL6P05231 212 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 GSTM5P46439 218 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 RXRGP48443 463 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms