RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
SYN3-202ENST00000358763 TTC25Q96NG3 672 aa12.29□□□□□ -0.44
SYN3-202ENST00000358763 TRPM5Q9NZQ8 1165 aa12.29□□□□□ -0.44
SYN3-202ENST00000358763 SLC12A6Q9UHW9 1150 aa12.29□□□□□ -0.44
SYN3-202ENST00000358763 DNMT3LQ9UJW3 386 aa12.29□□□□□ -0.44
SYN3-202ENST00000358763 RAD54BQ9Y620 910 aa12.29□□□□□ -0.44
SYN3-202ENST00000358763 LAMA3Q16787 3333 aa12.29□□□□□ -0.44
SYN3-202ENST00000358763 C2orf78A6NCI8 922 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 SMAPO00193 183 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 LILRB3O75022 631 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 CTSAP10619 480 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 ATP2A2P16615 1042 aaKnown RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 CAPN2P17655 700 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 CTNNB1P35222 781 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 IFI35P80217 286 aaPredicted RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 GABPB1Q06547 395 aaPredicted RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 SEMA5AQ13591 1074 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 TERF2Q15554 542 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 CCDC38Q502W7 563 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 HECTD3Q5T447 861 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 AGBL2Q5U5Z8 902 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 TTC19Q6DKK2 380 aaPredicted RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 C4orf22Q6V702 233 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 CAND1Q86VP6 1230 aaKnown RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 ZNF683Q8IZ20 524 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 ATPAF2Q8N5M1 289 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 RTL3Q8N8U3 475 aaKnown RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 A0A087WUV0 522 aaPredicted RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 FOXO6A8MYZ6 492 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 TGM5O43548 720 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 CXCL14O95715 111 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 IRF1P10914 325 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 OLIG2Q13516 323 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 NADSYN1Q6IA69 706 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 FBXL22Q6P050 247 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 PPP1R21Q6ZMI0 780 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 ZNF534Q76KX8 674 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 DNAJB7Q7Z6W7 309 aaPredicted RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 TCEAL8Q8IYN2 117 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 CLP1Q92989 425 aaKnown RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 C1orf74Q96LT6 269 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 CEP295NLQ96MC4 621 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 RPRD1AQ96P16 312 aaPredicted RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 ZNF334Q9HCZ1 680 aaPredicted RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 HSFX1Q9UBD0 423 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 TBK1Q9UHD2 729 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 CHD7Q9P2D1 2997 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 ZBTB24O43167 697 aaPredicted RBP12.28□□□□□ -0.44
SYN3-202ENST00000358763 JCHAINP01591 159 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 MAGEA6P43360 314 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 EPHB3P54753 998 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 SPARCL1Q14515 664 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 EFTUD2Q15029 972 aaKnown RBP eCLIP12.28□□□□□ -0.44
SYN3-202ENST00000358763 ATP11CQ8NB49 1132 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 RAD9AQ99638 391 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 TMEM109Q9BVC6 243 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 ZYG11BQ9C0D3 744 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.28□□□□□ -0.44
SYN3-202ENST00000358763 GKN1Q9NS71 199 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 FNIP2Q9P278 1114 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 TTLL3Q9Y4R7 772 aa12.28□□□□□ -0.44
SYN3-202ENST00000358763 EXOC1LA0A1B0GW35 172 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 CARNS1A5YM72 827 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 POC1B-GALNT4F8VUJ3 575 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 SCAMP3O14828 347 aaKnown RBP12.27□□□□□ -0.44
SYN3-202ENST00000358763 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.44
SYN3-202ENST00000358763 ABHD2P08910 425 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 TPSB2P20231 275 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 HTR7P34969 479 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 FDFT1P37268 417 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 ERVFC1P60507 584 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 NRG1Q02297 640 aaPredicted RBP12.27□□□□□ -0.44
SYN3-202ENST00000358763 RING1Q06587 406 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 TPSAB1Q15661 275 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 C6orf118Q5T5N4 469 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 PLPP4Q5VZY2 271 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 RFWD3Q6PCD5 774 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 NLRP14Q86W24 1093 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 PALM2Q8IXS6 379 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 OVCA2Q8WZ82 227 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 CFAP36Q96G28 342 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 MYRFLQ96LU7 910 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 TCF25Q9BQ70 676 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 TRIM56Q9BRZ2 755 aaKnown RBP12.27□□□□□ -0.44
SYN3-202ENST00000358763 RNF38Q9H0F5 515 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 TRPC7Q9HCX4 862 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 SMPD4Q9NXE4 827 aa12.27□□□□□ -0.44
SYN3-202ENST00000358763 NYNRINQ9P2P1 1898 aaKnown RBP12.27□□□□□ -0.45
SYN3-202ENST00000358763 MYO7AQ13402 2215 aa12.27□□□□□ -0.45
SYN3-202ENST00000358763 NUGGCQ68CJ6 796 aa12.27□□□□□ -0.45
SYN3-202ENST00000358763 C3orf62Q6ZUJ4 267 aa12.27□□□□□ -0.45
SYN3-202ENST00000358763 TTC16Q8NEE8 873 aa12.27□□□□□ -0.45
SYN3-202ENST00000358763 TLCD1Q96CP7 247 aa12.27□□□□□ -0.45
SYN3-202ENST00000358763 PGM2Q96G03 612 aa12.27□□□□□ -0.45
SYN3-202ENST00000358763 ROPN1BQ9BZX4 212 aaPredicted RBP12.27□□□□□ -0.45
SYN3-202ENST00000358763 PHACTR1Q9C0D0 580 aa12.27□□□□□ -0.45
SYN3-202ENST00000358763 NOL6Q9H6R4 1146 aaKnown RBP12.27□□□□□ -0.45
SYN3-202ENST00000358763 ROPN1Q9HAT0 212 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms