RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TRIM67Q6ZTA4 783 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF786Q8N393 782 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 AFAP1L2Q8N4X5 818 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PDZD8Q8NEN9 1154 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 FNIP1Q8TF40 1166 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 MZB1Q8WU39 189 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PHF21BQ96EK2 531 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 MFSD3Q96ES6 412 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 DTNBP1Q96EV8 351 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 MRPL45Q9BRJ2 306 aaKnown RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 TMEM79Q9BSE2 394 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 WDR41Q9HAD4 459 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 EFCAB1Q9HAE3 211 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 GPAMQ9HCL2 828 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PREBQ9HCU5 417 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PTPRHQ9HD43 1115 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PRMT7Q9NVM4 692 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.72□□□□□ -1.331e-8■□□□□ 9.6
CSDE1-203ENST00000358528 SIRPGQ9P1W8 387 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 VANGL2Q9ULK5 521 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 COMMD3-BMI1R4GMX3 469 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 A0A0A0MRY4 1105 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ATP6AP2A0A1C7CYW4 349 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ATP6AP2O75787 350 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 INSRRP14616 1297 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PTPRAP18433 802 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 AKAP5P24588 427 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 SERPINB8P50452 374 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF132P52740 706 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 STX1BP61266 288 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PPIDQ08752 370 aaKnown RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 AGKQ53H12 422 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 AAGABQ6PD74 315 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 TMC7Q7Z402 723 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PDSS2Q86YH6 399 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PLD6Q8N2A8 252 aaKnown RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PQLC3Q8N755 202 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 LRRC39Q96DD0 335 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 P2RY11Q96G91 374 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 SIGLEC10Q96LC7 697 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 SPATA13Q96N96 652 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 TBCBQ99426 244 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 SLC4A5Q9BY07 1137 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 VPS33BQ9H267 617 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 LIN28AQ9H9Z2 209 aaKnown RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 SNTG2Q9NY99 539 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 THEGQ9P2T0 379 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 TSR3Q9UJK0 312 aaKnown RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF214Q9UL59 606 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 GNEQ9Y223 722 aaKnown RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ASB3Q9Y575 518 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 MFSD11O43934 449 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PMPCBO75439 489 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 FARP2O94887 1054 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 MOCS2O96007 188 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF286BP0CG31 522 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 HNRNPLP14866 589 aaKnown RBP eCLIP6.72□□□□□ -1.335e-8■□□□□ 8.7
CSDE1-203ENST00000358528 PGAM1P18669 254 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 XRCC1P18887 633 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ME2P23368 584 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ADIGQ0VDE8 80 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 RALGDSQ12967 914 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 CCNIQ14094 377 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF460Q14592 562 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 KCTD21Q4G0X4 260 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 METTL7BQ6UX53 244 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 DSELQ8IZU8 1212 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 NUP93Q8N1F7 819 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 SLC2A14Q8TDB8 520 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 KCTD4Q8WVF5 259 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 CYGBQ8WWM9 190 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 CSPG4P5Q96PW8 444 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 EFHD1Q9BUP0 239 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 XYLT2Q9H1B5 865 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 UPF3AQ9H1J1 476 aaKnown RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PIF1Q9H611 641 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 LRRC40Q9H9A6 602 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ARHGEF4Q9NR80 690 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 SIX4Q9UIU6 781 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF180Q9UJW8 692 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 MAFBQ9Y5Q3 323 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 C2P06681 752 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 MCF2P10911 925 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 FGF3P11487 239 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-203ENST00000358528 CNTFP26441 200 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 CRABP2P29373 138 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 RPL5P46777 297 aaKnown RBP6.71□□□□□ -1.33
CSDE1-203ENST00000358528 GRIA4P48058 902 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 THOP1P52888 689 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 B3GNT6Q6ZMB0 384 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 LPCAT2Q7L5N7 544 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 KCNMB4Q86W47 210 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 MYO1HQ8N1T3 1032 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.71□□□□□ -1.333e-12■□□□□ 9.4
CSDE1-203ENST00000358528 AGBL3Q8NEM8 1001 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 OR6P1Q8NGX9 317 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 URGCPQ8TCY9 931 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 DHRS4Q9BTZ2 278 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms