RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 CYP2A7P20853 494 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 NEDD8Q15843 81 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 ABRAXAS1Q6UWZ7 409 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 KDM6AO15550 1401 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 USP6P35125 1406 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 RRN3P2A6NIE6 340 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 A8MX80 341 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 UBDO15205 165 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 URODP06132 367 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 RASSF5Q8WWW0 418 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 LPAR1Q92633 364 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 NSMCE2Q96MF7 247 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 AHSPQ9NZD4 102 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 CHKBQ9Y259 395 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 GPR182O15218 404 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 ITGALP20701 1170 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 FCGRTP55899 365 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 PDK3Q15120 406 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 RPTNQ6XPR3 784 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 DEFB128Q7Z7B8 93 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 SCAIQ8N9R8 606 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 FNDC5Q8NAU1 212 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 FBXO36Q8NEA4 188 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 AP4E1Q9UPM8 1137 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 TMEM114B3SHH9 223 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 TPD52L2O43399 206 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 MT-CO1P00395 513 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 FESP07332 822 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 NPR3P17342 541 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 MYBPC2Q14324 1141 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 ZDHHC13Q8IUH4 622 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 CAPSLQ8WWF8 208 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 NUAK2Q9H093 628 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 PTGES3LE9PB15 166 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 HBP1O60381 514 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 SCNN1BP51168 640 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 CCDC36Q8IYA8 594 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 RHBGQ9H310 441 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 IGFLR1Q9H665 355 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 GPAMQ9HCL2 828 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 ANKRD6Q9Y2G4 727 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 GSG1L2A8MUP6 293 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 ADCY6O43306 1168 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 MAD2L1Q13257 205 aaPredicted RBP11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 BOP1Q14137 746 aaKnown RBP11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 POU6F1Q14863 301 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 LRRC40Q9H9A6 602 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 USP18Q9UMW8 372 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 CPA3P15088 417 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 RCVRNP35243 200 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 AKAP14Q86UN6 197 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 CLEC10AQ8IUN9 316 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 CHPFQ8IZ52 775 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 CROTQ9UKG9 612 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 DRG1Q9Y295 367 aaKnown RBP11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 WDR37Q9Y2I8 494 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 MRPL42Q9Y6G3 142 aaKnown RBP11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 CCDC182A6NF36 153 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 SCGNO76038 276 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 TSHRP16473 764 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 TGFBR2P37173 567 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 HPCAL1P37235 193 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 HERVK_113P62684 666 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 CUL2Q13617 745 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 ESRP1Q6NXG1 681 aaKnown RBP11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 MFSD1Q9H3U5 465 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 VANGL2Q9ULK5 521 aa11.71□□□□□ -0.53
SPTBN1-202ENST00000356805 MYMKA6NI61 221 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 CTXN3Q4LDR2 81 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 GLT1D1Q96MS3 346 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 CCNB1IP1Q9NPC3 277 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 TBX20Q9UMR3 447 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 CASTOR2A6NHX0 329 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 C19orf81C9J6K1 198 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 NUDT17P0C025 328 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 MARSP56192 900 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 SPIRE1Q08AE8 756 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 PACS1Q6VY07 963 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 IGDCC4Q8TDY8 1250 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 RIBC2Q9H4K1 309 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 ING3Q9NXR8 418 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 TFR2Q9UP52 801 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 INPP4BO15327 924 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 LSM8O95777 96 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 HOXB8P17481 243 aaPredicted RBP11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 MAPK10P53779 464 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 SCRN3Q0VDG4 424 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 TBX2Q13207 712 aaPredicted RBP11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 BLMHQ13867 455 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 C2CD6Q53TS8 623 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 DAGLBQ8NCG7 672 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 COL26A1Q96A83 441 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 ZNF446Q9NWS9 450 aa11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 RBM7Q9Y580 266 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-202ENST00000356805 FLT1P17948 1338 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms