RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 PRICKLE1Q96MT3 831 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 PIF1Q9H611 641 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 PLAC1Q9HBJ0 212 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 PTTG2Q9NZH5 202 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 FETUBQ9UGM5 382 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 ITGA11Q9UKX5 1188 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 TMX2-CTNND1H3BSU7 103 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 CCNT2O60583 730 aaKnown RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 GPC4O75487 556 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 HNRNPLP14866 589 aaKnown RBP eCLIP13.92□□□□□ -0.183e-8■■■□□ 17.7
TRIM4-203ENST00000355947 EEF1B2P24534 225 aaKnown RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 SLC5A2P31639 672 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 ZNF143P52747 638 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 LY6KQ17RY6 165 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 LSM12Q3MHD2 195 aaKnown RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 SLC44A4Q53GD3 710 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 PDCD6IPQ8WUM4 868 aaKnown RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 CYGBQ8WWM9 190 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 MFSD3Q96ES6 412 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 SORT1Q99523 831 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 APBA2Q99767 749 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 TRIM8Q9BZR9 551 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 HSFX1Q9UBD0 423 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 AP4E1Q9UPM8 1137 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 PCDHA11Q9Y5I1 949 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 CDY2AQ9Y6F7 541 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 CDY1Q9Y6F8 540 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 GJA3Q9Y6H8 435 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 RNF103-CHMP3A0A140T963 221 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 RNF103O00237 685 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 VWA5AO00534 786 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 CASQ2O14958 399 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 JUNP05412 331 aaKnown RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 UGT1A6P19224 532 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 ARL4AP40617 200 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 MAP1SQ66K74 1059 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 JADE1Q6IE81 842 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 POTEAQ6S8J7 498 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 CHST15Q7LFX5 561 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 LILRA2Q8N149 483 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 THAP11Q96EK4 314 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 GATA5Q9BWX5 397 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 ILKAPQ9H0C8 392 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 NOL11Q9H8H0 719 aaKnown RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 COQ10BQ9H8M1 238 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 GMPR2Q9P2T1 348 aaKnown RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 TCRBV5S1A1TA0A578 114 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 ZNF839A8K0R7 811 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 LACTBL1A8MY62 500 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 H3BNX3 289 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 PLSCR1O15162 318 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 TIPRLO75663 272 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 RXRBP28702 533 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 ZNF132P52740 706 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 LAMTOR4Q0VGL1 99 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 CEACAM7Q14002 265 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 USP10Q14694 798 aaKnown RBP13.91□□□□□ -0.18
TRIM4-203ENST00000355947 SEL1L3Q68CR1 1132 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 PMF1Q6P1K2 205 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 ARCQ7LC44 396 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 NIPA1Q7RTP0 329 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 NCAPG2Q86XI2 1143 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 UBR7Q8N806 425 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 ACVR1CQ8NER5 493 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 ARMC7Q9H6L4 198 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 EPS15L1Q9UBC2 864 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 DCDC2Q9UHG0 476 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 TRDMT1O14717 391 aaKnown RBP13.91□□□□□ -0.18
TRIM4-203ENST00000355947 THRAP10827 490 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 TGM2P21980 687 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 NR4A1P22736 598 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 ME2P23368 584 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 LPIN1Q14693 890 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 CCDC14Q49A88 953 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 ABHD15Q6UXT9 468 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 FAM47BQ8NA70 645 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 RRN3Q9NYV6 651 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 STRNO43815 780 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 EGFRP00533 1210 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 PRKCHP24723 683 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 CSE1LP55060 971 aaKnown RBP13.91□□□□□ -0.18
TRIM4-203ENST00000355947 PABPC1LQ4VXU2 614 aaKnown RBP13.91□□□□□ -0.18
TRIM4-203ENST00000355947 RYBPQ8N488 228 aaPredicted RBP13.91□□□□□ -0.18
TRIM4-203ENST00000355947 C1orf127Q8N9H9 656 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 FERMT1Q9BQL6 677 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 CDH19Q9H159 772 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 AKT3Q9Y243 479 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 PPME1Q9Y570 386 aa13.91□□□□□ -0.18
TRIM4-203ENST00000355947 NEMP2A6NFY4 417 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 BIRC5O15392 142 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 RNASEH2AO75792 299 aaKnown RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 TUBB3Q13509 450 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 NEDD8Q15843 81 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 CCDC142Q17RM4 750 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 ANKDD1AQ495B1 522 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 ARL13AQ5H913 290 aaPredicted RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 STYK1Q6J9G0 422 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 KLHL35Q6PF15 583 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms