RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 POMCP01189 267 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 NAA20P61599 178 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 RAB6CQ53S08 254 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 PMF1Q6P1K2 205 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 BBS12Q6ZW61 710 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 DGCR6LQ9BY27 220 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 NMUR2Q9GZQ4 415 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 HAPLN2Q9GZV7 340 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 RAB6CQ9H0N0 254 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 HACD3Q9P035 362 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 TUBGCP4Q9UGJ1 667 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 STARD13Q9Y3M8 1113 aa14.38□□□□□ -0.11
SREBF1-202ENST00000355815 MYH7BA7E2Y1 1941 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 TAF4O00268 1085 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 GAS2O43903 313 aaKnown RBP14.37□□□□□ -0.11
SREBF1-202ENST00000355815 MSCO60682 206 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 GOT1P17174 413 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 BST1Q10588 318 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 MAPRE2Q15555 327 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 ZNF484Q5JVG2 852 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 WLSQ5T9L3 541 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 N4BP2L1Q5TBK1 243 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-202ENST00000355815 MTHFD1LQ6UB35 978 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 CLNKQ7Z7G1 428 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 ABI1Q8IZP0 508 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 PYROXD2Q8N2H3 581 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 GALNT15Q8N3T1 639 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 FBXL18Q96ME1 805 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 R3HDMLQ9H3Y0 253 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 C16orf96A6NNT2 1141 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 GSC2O15499 205 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 HMOX2P30519 316 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 GRIK1P39086 918 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 TKTL1P51854 596 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 RTP1P59025 263 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 AGKQ53H12 422 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 ADGRF2Q8IZF7 708 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 CLEC4CQ8WTT0 213 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 CPSF3Q9UKF6 684 aaKnown RBP14.37□□□□□ -0.11
SREBF1-202ENST00000355815 SRRM3A6NNA2 597 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-202ENST00000355815 TPBGLP0DKB5 382 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 EPHX2P34913 555 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 RPL5P46777 297 aaKnown RBP14.37□□□□□ -0.11
SREBF1-202ENST00000355815 RSBN1Q5VWQ0 802 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-202ENST00000355815 BHMTQ93088 406 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 RNF157Q96PX1 679 aa14.37□□□□□ -0.11
SREBF1-202ENST00000355815 PRR5-ARHGAP8B1AHC4 643 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ALOX15BO15296 676 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 CLOCKO15516 846 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 TGM2P21980 687 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ALDH1A3P47895 512 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 GSSP48637 474 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 SERPINB9P50453 376 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ARHGAP8P85298 464 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 GTF2H3Q13889 308 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 AMIGO2Q86SJ2 522 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ZNF555Q8NEP9 628 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ZBTB18Q99592 522 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 SPON1Q9HCB6 807 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 MRGBPQ9NV56 204 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 GLI3P10071 1580 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 TMEM63AO94886 807 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 BTBD8Q5XKL5 378 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 DHDDSQ86SQ9 333 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ULK2Q8IYT8 1036 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 GPC2Q8N158 579 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 KYQ8NBH2 561 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 SYT15Q9BQS2 421 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ZNF395Q9H8N7 513 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-202ENST00000355815 OLA1Q9NTK5 396 aaKnown RBP14.36□□□□□ -0.11
SREBF1-202ENST00000355815 UBQLN1Q9UMX0 589 aaKnown RBP14.36□□□□□ -0.11
SREBF1-202ENST00000355815 TNFSF13BQ9Y275 285 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 IQCA1LA6NCM1 817 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 CELF2O95319 508 aaKnown RBP14.36□□□□□ -0.11
SREBF1-202ENST00000355815 SPRP35270 261 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-202ENST00000355815 SLC6A3Q01959 620 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 FOLH1Q04609 750 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 PDK4Q16654 411 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 MSS51Q4VC12 460 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 XYLT1Q86Y38 959 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 PCYOX1LQ8NBM8 494 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 SLC4A11Q8NBS3 891 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 STKLD1Q8NE28 680 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 MAGEC3Q8TD91 643 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 CD101Q93033 1021 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 MROH8Q9H579 483 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 CHST12Q9NRB3 414 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 AAASQ9NRG9 546 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ETNK2Q9NVF9 386 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 ADGRA2Q96PE1 1338 aa14.36□□□□□ -0.11
SREBF1-202ENST00000355815 PPEF2O14830 753 aa14.35□□□□□ -0.11
SREBF1-202ENST00000355815 EDF1O60869 148 aaKnown RBP14.35□□□□□ -0.11
SREBF1-202ENST00000355815 POLBP06746 335 aa14.35□□□□□ -0.11
SREBF1-202ENST00000355815 GRIA1P42261 906 aa14.35□□□□□ -0.11
SREBF1-202ENST00000355815 ZNF143P52747 638 aaPredicted RBP14.35□□□□□ -0.11
SREBF1-202ENST00000355815 CBX3Q13185 183 aa14.35□□□□□ -0.11
SREBF1-202ENST00000355815 CA9Q16790 459 aa14.35□□□□□ -0.11
SREBF1-202ENST00000355815 PIWIL1Q96J94 861 aaKnown RBP14.35□□□□□ -0.11
SREBF1-202ENST00000355815 ZFP42Q96MM3 310 aa14.35□□□□□ -0.11
SREBF1-202ENST00000355815 ZNF317Q96PQ6 595 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms