RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TAS1R2Q8TE23 839 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 QKIQ96PU8 341 aaKnown RBP eCLIP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 TRIT1Q9H3H1 467 aaKnown RBP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 REEP1Q9H902 201 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 H3BQF6 201 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 RAMP2O60895 175 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 TYMPP19971 482 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 S100A3P33764 101 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 SRP54P61011 504 aaKnown RBP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 ZDHHC17Q8IUH5 632 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 ANKRD13AQ8IZ07 590 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 RRN3Q9NYV6 651 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 NR2C2P49116 596 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 FRG1Q14331 258 aaKnown RBP15.16■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF621Q6ZSS3 439 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 CEP41Q9BYV8 373 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 FAM192AQ9GZU8 254 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 NUAK2Q9H093 628 aa15.16■□□□□ 0.02
LMX1B-201ENST00000355497 KCNQ2O43526 872 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 CSF1RP07333 972 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 CYP2A6P11509 494 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-201ENST00000355497 GMPSP49915 693 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-201ENST00000355497 HNMTP50135 292 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 TBX4P57082 545 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF470Q6ECI4 717 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 RETSATQ6NUM9 610 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 IRGCQ6NXR0 463 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 MCOLN2Q8IZK6 566 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 DGCR6LQ9BY27 220 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 PXDNLA1KZ92 1463 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 HLA-DQA2P01906 255 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 FOSL2P15408 326 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 PLD1Q13393 1074 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 TTI2Q6NXR4 508 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 PROSER1Q86XN7 944 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 POU5F2Q8N7G0 328 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 TEKT5Q96M29 485 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 TBCBQ99426 244 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 DDX43Q9NXZ2 648 aaKnown RBP15.15■□□□□ 0.02
LMX1B-201ENST00000355497 NINJ2Q9NZG7 142 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 MCM8Q9UJA3 840 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 A0A087WZ62 844 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 GPR75-ASB3A0A0A6YYF3 556 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 TAF4O00268 1085 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 BTN3A1O00481 513 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 RPLP2P05387 115 aaKnown RBP15.15■□□□□ 0.02
LMX1B-201ENST00000355497 COX7A2P14406 83 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 DNAJC14Q6Y2X3 702 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-201ENST00000355497 FBXO33Q7Z6M2 555 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 ARHGEF19Q8IW93 802 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 ADHFE1Q8IWW8 467 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 DLG3Q92796 817 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 NRDE2Q9H7Z3 1164 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 SAR1AQ9NR31 198 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 CRNNQ9UBG3 495 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-201ENST00000355497 C15orf41Q9Y2V0 281 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 RPS12P25398 132 aaKnown RBP15.15■□□□□ 0.02
LMX1B-201ENST00000355497 WEE1P30291 646 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 GTF2A2P52657 109 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 TAF5Q15542 800 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 BHLHE22Q8NFJ8 381 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-201ENST00000355497 EEF1AKMT1Q8WVE0 214 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 CCDC167Q9P0B6 97 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 ANAPC2Q9UJX6 822 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 ENTPD4Q9Y227 616 aa15.15■□□□□ 0.02
LMX1B-201ENST00000355497 LRRC14BA6NHZ5 514 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 ARP10275 920 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 CDC42P60953 191 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 MSLNQ13421 630 aaPredicted RBP15.14■□□□□ 0.01
LMX1B-201ENST00000355497 ACOX1Q15067 660 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 STK32AQ8WU08 396 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 HGH1Q9BTY7 390 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 HACD1B0YJ81 288 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 MYL4P12829 197 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 UQCRBP14927 111 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 SREBF1P36956 1147 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 GPR1P46091 355 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 RHAGQ02094 409 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 CYP2A13Q16696 494 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 FBXO47Q5MNV8 452 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 IL27RAQ6UWB1 636 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF720Q7Z2F6 126 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 FAM220AQ7Z4H9 259 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 RNF148Q8N7C7 305 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF75CPQ92670 426 aaPredicted RBP15.14■□□□□ 0.01
LMX1B-201ENST00000355497 PANX3Q96QZ0 392 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 ANKZF1Q9H8Y5 726 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 BTBD3Q9Y2F9 522 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 CCDC189A1A4V9 331 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 FAM187BQ17R55 369 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 STX12Q86Y82 276 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 ULK2Q8IYT8 1036 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 SLC9A7Q96T83 725 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 DEFB129Q9H1M3 183 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 ATP13A1Q9HD20 1204 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 COMMD9Q9P000 198 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 TMEM216Q9P0N5 145 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 NDOR1Q9UHB4 597 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 BARX2Q9UMQ3 279 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms