RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ATAD3BQ5T9A4 648 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 APOPT1Q96IL0 206 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 NDUFAF1Q9Y375 327 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 FRMPD1Q5SYB0 1578 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 HACD1B0YJ81 288 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 PTPN4P29074 926 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 ABCG1P45844 678 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 IRX1P78414 480 aaPredicted RBP13.46□□□□□ -0.25
SCN8A-202ENST00000355133 PPIL2Q13356 520 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 XRCC4Q13426 336 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 NPNTQ6UXI9 565 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 TRAPPC5Q8IUR0 188 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 CAMKK1Q8N5S9 505 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 PIK3R5Q8WYR1 880 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 APBB2Q92870 758 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 CAVIN3Q969G5 261 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 PORCNQ9H237 461 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 PDP2Q9P2J9 529 aa13.46□□□□□ -0.25
SCN8A-202ENST00000355133 TBC1D3BA6NDS4 549 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 POM121L1PQ3SYA9 428 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 TMEM86AQ8N2M4 240 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 ARMC7Q9H6L4 198 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 ANKZF1Q9H8Y5 726 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 SAE1Q9UBE0 346 aaPredicted RBP13.46□□□□□ -0.26
SCN8A-202ENST00000355133 VPS51Q9UID3 782 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 L1RE1Q9UN81 338 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 DIP2CQ9Y2E4 1556 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.26
SCN8A-202ENST00000355133 ZC3H13Q5T200 1668 aaKnown RBP13.46□□□□□ -0.26
SCN8A-202ENST00000355133 EIF4BP23588 611 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 NUP107P57740 925 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 FAM98BQ52LJ0 330 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 OTUD3Q5T2D3 398 aaPredicted RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 MARK2Q7KZI7 788 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DET1Q7L5Y6 550 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 KIAA0319LQ8IZA0 1049 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 CYP4Z2PQ8N1L4 340 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 SUSD6Q92537 303 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 PRRG3Q9BZD7 231 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DUSP12Q9UNI6 340 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 A0A1B0GW55 424 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 CES2O00748 559 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 AP5Z1O43299 807 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 PGK1P00558 417 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DUX4L2P0CJ85 424 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DUX4L3P0CJ86 424 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DUX4L4P0CJ87 422 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DUX4L5P0CJ88 424 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DUX4L6P0CJ89 424 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DUX4L7P0CJ90 424 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 RAP1GAP2Q684P5 730 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 IZUMO2Q6UXV1 221 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 RNF148Q8N7C7 305 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 USP7Q93009 1102 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 POLR1EQ9GZS1 481 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 RHBGQ9H310 441 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 MRPL17Q9NRX2 175 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DUX4Q9UBX2 424 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 FAM50BQ9Y247 325 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 ANKRD6Q9Y2G4 727 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 INPP4BO15327 924 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 FAM20BO75063 409 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 ZSCAN5DPP0CG00 497 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DPYSL3Q14195 570 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 CRY1Q16526 586 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 ZC3H12AQ5D1E8 599 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 USP50Q70EL3 339 aaPredicted RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 KAT5Q92993 513 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 NSMCE2Q96MF7 247 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 TMEM79Q9BSE2 394 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 TINF2Q9BSI4 451 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 HGH1Q9BTY7 390 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 CHST7Q9NS84 486 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 MYPNQ86TC9 1320 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 ZBTB22O15209 634 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 ZBTB14O43829 449 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 FAM153BP0C7A2 387 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 ATP6V1C1P21283 382 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 DDR1Q08345 913 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 KPNB1Q14974 876 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 TRIM16LQ309B1 348 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 FAM153CQ494X1 144 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 CYP20A1Q6UW02 462 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 CATSPERGQ6ZRH7 1159 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 POU5F2Q8N7G0 328 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 SNRNP27Q8WVK2 155 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 PANX3Q96QZ0 392 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 FAM198AQ9UFP1 575 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 PHGDHO43175 533 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 BUD23O43709 281 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 SMIM10L2AP0DMW4 78 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 SMIM10L2BP0DMW5 78 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 FCGR1AP12314 374 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 ATP5C1P36542 298 aaKnown RBP13.45□□□□□ -0.26
SCN8A-202ENST00000355133 GPR15P49685 360 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 GSTA3Q16772 222 aa13.45□□□□□ -0.26
SCN8A-202ENST00000355133 IRAK1BP1Q5VVH5 260 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms