RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SURF1Q15526 300 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 BSPRYQ5W0U4 402 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 PTAR1Q7Z6K3 402 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 C7orf31Q8N865 590 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 PPP1R14BQ96C90 147 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 HPDLQ96IR7 371 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 LRGUKQ96M69 825 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 B3GNT5Q9BYG0 378 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 ASNSD1Q9NWL6 643 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 FAM32AQ9Y421 112 aaKnown RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 PAPPA2Q9BXP8 1791 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 MCM3APO60318 1980 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 SH3PXD2BA1X283 911 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 TRIM64CA6NLI5 447 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 CXorf49A8MYA2 514 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 CYB561D2O14569 222 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 TOP3BO95985 862 aaKnown RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 ZBED1O96006 694 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 TXNP10599 105 aaKnown RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 CDH5P33151 784 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 ALDH1A3P47895 512 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 C21orf59P57076 290 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 ITGADQ13349 1161 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 TGFBIQ15582 683 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 CA9Q16790 459 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 PERM1Q5SV97 790 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 LDLRAP1Q5SW96 308 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 POTEHQ6S545 545 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 CDHR3Q6ZTQ4 885 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 FAM183BPQ6ZVS7 135 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 SCUBE3Q8IX30 993 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 CENPSQ8N2Z9 138 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 Q8N9G6 341 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 BANPQ8N9N5 519 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 HPS1Q92902 700 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 APOL6Q9BWW8 343 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 TSPAN16Q9UKR8 245 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 RLFQ13129 1914 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 CENPFP49454 3210 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 LOC285556D6RIA3 1793 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 E9PBE3 544 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 GIPC1O14908 333 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 NCF2P19878 526 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 TCN1P20061 433 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 ARL1P40616 181 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 ATXN1P54253 815 aaKnown RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 BCAR1P56945 870 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 MRPS22P82650 360 aaKnown RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 MAP3K21Q5TCX8 1036 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 FAAH2Q6GMR7 532 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 EXOC8Q8IYI6 725 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 BBS5Q8N3I7 341 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 FAM167AQ96KS9 214 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 COPS7BQ9H9Q2 264 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 SIAEQ9HAT2 523 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 THEGQ9P2T0 379 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 POLR2AP24928 1970 aaKnown RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 IQANK1A0A1B0GTG1 560 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 COPEO14579 308 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 B4GALT4O60513 344 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 FKBP6O75344 327 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 USP2O75604 605 aaPredicted RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 CRTAMO95727 393 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 NAT2P11245 290 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 CDH2P19022 906 aaPredicted RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 GPD1P21695 349 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 MZF1P28698 734 aaPredicted RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 GPD2P43304 727 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 NKX2-5P52952 324 aaPredicted RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 CYP2A13Q16696 494 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 Q3C1V9 767 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 KRT80Q6KB66 452 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 Q6ZNX1 250 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 ACOT1Q86TX2 421 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 DEFB107AQ8IZN7 70 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 CMASQ8NFW8 434 aaPredicted RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 SKA1Q96BD8 255 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 HNRNPABQ99729 332 aaKnown RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 C2orf40Q9H1Z8 148 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 CXCL16Q9H2A7 254 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 RSAD1Q9HA92 442 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 TXNRD2Q9NNW7 524 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 ARHGEF4Q9NR80 690 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 ZC3H7BQ9UGR2 993 aaKnown RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 TAGLN3Q9UI15 199 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 SYNJ2BP-COX16A0A087WUM0 186 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 E2F8A0AVK6 867 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 HCRTO43612 131 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 TNFAIP8O95379 198 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 FAM58BPP0C7Q3 252 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 TFE3P19532 575 aaPredicted RBP9.6□□□□□ -0.87
SMG6-202ENST00000354901 CYP3A5P20815 502 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 PTPN7P35236 360 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 BCAP31P51572 246 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 DNAL1Q4LDG9 190 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 GLRA4Q5JXX5 417 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 MROH9Q5TGP6 573 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 ZNF410Q86VK4 478 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 SCAIQ8N9R8 606 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms