RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 MFSD3Q96ES6 412 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 TNIP3Q96KP6 325 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 ZNF560Q96MR9 790 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 KCNK16Q96T55 309 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 DUSP16Q9BY84 665 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 SNX15Q9NRS6 342 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 DCDC2Q9UHG0 476 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 ZNF487B1APH4 448 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 XPO1O14980 1071 aaKnown RBP20.05■□□□□ 0.8
COL13A1-201ENST00000354547 CD4P01730 458 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 SKIP12755 728 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 ERCC2P18074 760 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 CCNHP51946 323 aaPredicted RBP20.05■□□□□ 0.8
COL13A1-201ENST00000354547 IRF9Q00978 393 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 EDEM1Q92611 657 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 FAM124BQ9H5Z6 455 aaPredicted RBP20.05■□□□□ 0.8
COL13A1-201ENST00000354547 KRT82Q9NSB4 513 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 MAGEC1O60732 1142 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 SIN3BO75182 1162 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 MLNP12872 115 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 RAP1GDS1P52306 607 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 SMYD5Q6GMV2 418 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 PYDC1Q8WXC3 89 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 ULBP1Q9BZM6 244 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 COPG2Q9UBF2 871 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 PPM1HQ9ULR3 514 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 A6NHS1 94 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 MEIS3P2A8K0S8 358 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 PPP1R12AO14974 1030 aaPredicted RBP20.04■□□□□ 0.8
COL13A1-201ENST00000354547 TREHO43280 583 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 PROCP04070 461 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 SERPINE1P05121 402 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 PRKCGP05129 697 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 ANPEPP15144 967 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 NPR3P17342 541 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 PTPN1P18031 435 aaKnown RBP20.04■□□□□ 0.8
COL13A1-201ENST00000354547 NOS2P35228 1153 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 TWF2Q6IBS0 349 aaKnown RBP20.04■□□□□ 0.8
COL13A1-201ENST00000354547 MAML3Q96JK9 1138 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 SORT1Q99523 831 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 DDX50Q9BQ39 737 aaKnown RBP20.04■□□□□ 0.8
COL13A1-201ENST00000354547 PACSIN3Q9UKS6 424 aa20.04■□□□□ 0.8
COL13A1-201ENST00000354547 YJEFN3A6XGL0 299 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 CPA3P15088 417 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 IDH3AP50213 366 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 PAQR9Q6ZVX9 377 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 GPR142Q7Z601 462 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 ACVR1CQ8NER5 493 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 EMID1Q96A84 441 aaPredicted RBP20.03■□□□□ 0.8
COL13A1-201ENST00000354547 STAP1Q9ULZ2 295 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 SOX13Q9UN79 622 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 PLXNA1Q9UIW2 1896 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 BTBD19C9JJ37 291 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 E9PBE3 544 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 I6L893 689 aaPredicted RBP20.03■□□□□ 0.8
COL13A1-201ENST00000354547 ZBTB24O43167 697 aaPredicted RBP20.03■□□□□ 0.8
COL13A1-201ENST00000354547 MAP3K13O43283 966 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 KLHL41O60662 606 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 USP17L7P0C7H9 530 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 UBTFL6P0CB48 400 aaPredicted RBP20.03■□□□□ 0.8
COL13A1-201ENST00000354547 NCAM1P13591 858 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 GP5P40197 560 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 CBLBQ13191 982 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 TUBB3Q13509 450 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 DNAL1Q4LDG9 190 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 FAM91A1Q658Y4 838 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 RAB3IL1Q8TBN0 382 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 USP33Q8TEY7 942 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 WNT8BQ93098 351 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 TINF2Q9BSI4 451 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 VANGL2Q9ULK5 521 aa20.03■□□□□ 0.8
COL13A1-201ENST00000354547 DCXO43602 365 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 TPI1P60174 286 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 SNX17Q15036 470 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 CFAP157Q5JU67 520 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 KIAA0319Q5VV43 1072 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 CLEC20AQ6ZU45 233 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 CELF6Q96J87 481 aaKnown RBP20.02■□□□□ 0.8
COL13A1-201ENST00000354547 NPY6RQ99463 290 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 CCL15-CCL14A0A0B4J2E2 113 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 GOLGA8QA0A0J9YX86 632 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 GOLGA8OA6NCC3 632 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 GOLGA8NF8WBI6 632 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 DAB1O75553 588 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 TOMM70O94826 608 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 PTPN3P26045 913 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 GLUD2P49448 558 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 MRPS35P82673 323 aaKnown RBP20.02■□□□□ 0.8
COL13A1-201ENST00000354547 CCL15Q16663 113 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 SV2CQ496J9 727 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 FSTL4Q6MZW2 842 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 IZUMO2Q6UXV1 221 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 GPRIN1Q7Z2K8 1008 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 NET1Q7Z628 596 aaPredicted RBP20.02■□□□□ 0.8
COL13A1-201ENST00000354547 PHTF2Q8N3S3 785 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 NPLOC4Q8TAT6 608 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 ACMSDQ8TDX5 336 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 RHOBTB2Q9BYZ6 727 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 UNKQ9C0B0 810 aaKnown RBP20.02■□□□□ 0.8
COL13A1-201ENST00000354547 CHRAC1Q9NRG0 131 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms