RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TAMM41Q96BW9 452 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 WNK4Q96J92 1243 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ZBTB45Q96K62 511 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 RANBP9Q96S59 729 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ZC3H12CQ9C0D7 883 aaKnown RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ILKAPQ9H0C8 392 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 SACM1LQ9NTJ5 587 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 PI4KBQ9UBF8 816 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ZNHIT2Q9UHR6 403 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 USP18Q9UMW8 372 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 WDR90Q96KV7 1748 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 HMX2A2RU54 273 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 LRRIQ4A6NIV6 560 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 GOLGA8TH3BQL2 631 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 PRPSAP2O60256 369 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 MPSTP25325 297 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ADORA2AP29274 412 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 SOX11P35716 441 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 WNT7BP56706 349 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 MTMR1Q13613 665 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 SPIDRQ14159 915 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF362Q5T0B9 420 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 METTL21CQ5VZV1 264 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 CAND1Q86VP6 1230 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 OR5B17Q8NGF7 314 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 APBB2Q92870 758 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ATP6V0A1Q93050 837 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 CCDC138Q96M89 665 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 EBNA1BP2Q99848 306 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 SLX1AQ9BQ83 275 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 MSTO1Q9BUK6 570 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 INO80BQ9C086 356 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 VPS51Q9UID3 782 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 EMCNQ9ULC0 261 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 MYO18AQ92614 2054 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 THSD7BQ9C0I4 1608 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF839A8K0R7 811 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 EXTL3O43909 919 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 VNN1O95497 513 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 BCL10O95999 233 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 S100BP04271 92 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 KRT19P08727 400 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 JAK1P23458 1154 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ARRB2P32121 409 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 GARSP41250 739 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 IREB2P48200 963 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 BMXP51813 675 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 LSM12Q3MHD2 195 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 PIGGQ5H8A4 983 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF618Q5T7W0 954 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 FAM102AQ5T9C2 384 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 SEL1L3Q68CR1 1132 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 NIPAL1Q6NVV3 410 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 RWDD4Q6NW29 188 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 CHST15Q7LFX5 561 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 RP9Q8TA86 221 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 TRPC4APQ8TEL6 797 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 DCPSQ96C86 337 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 TSNARE1Q96NA8 513 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ADPGKQ9BRR6 497 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 MTG1Q9BT17 334 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 FRMD8Q9BZ67 464 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 NAA50Q9GZZ1 169 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 PNPLA8Q9NP80 782 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 OLAHQ9NV23 265 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 GIN1Q9NXP7 522 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 TUBA8Q9NY65 449 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 WARS2Q9UGM6 360 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 POLLQ9UGP5 575 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 NARFQ9UHQ1 456 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM98Q9Y2Y6 226 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 PTPRJQ12913 1337 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 C3orf70A6NLC5 250 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 KPNA7A9QM74 516 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 C4BPAP04003 597 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 CHRNGP07510 517 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 IL1R1P14778 569 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF26P17031 533 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 CD247P20963 164 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 PTPN7P35236 360 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 CSE1LP55060 971 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 SLC25A11Q02978 314 aaKnown RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 SLC10A2Q12908 348 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 DENND1BQ6P3S1 775 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 KCNT2Q6UVM3 1135 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 ATG14Q6ZNE5 492 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 KIAA0319LQ8IZA0 1049 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 PGAM4Q8N0Y7 254 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 SLC15A4Q8N697 577 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 CCNYL1Q8N7R7 359 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 APBA2Q99767 749 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 SEPT9Q9UHD8 586 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-201ENST00000352993 AFG3L2Q9Y4W6 797 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 PCDHAC2Q9Y5I4 1007 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 IRS2Q9Y4H2 1338 aa7.8□□□□□ -1.16
BRCA1-201ENST00000352993 PRSS51A0A1B0GVH4 220 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 FAM149AA5PLN7 773 aa7.79□□□□□ -1.16
BRCA1-201ENST00000352993 H3BMQ9 156 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms