RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 NLRP14Q86W24 1093 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 ZNF558Q96NG5 402 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 PAFAH2Q99487 392 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 EBNA1BP2Q99848 306 aaKnown RBP18.97■□□□□ 0.63
TRIM41-202ENST00000351937 COL4A6Q14031 1691 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 TMEM120BA0PK00 339 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 GMNCA6NCL1 334 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 TRDMT1O14717 391 aaKnown RBP18.97■□□□□ 0.63
TRIM41-202ENST00000351937 CPP00450 1065 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 CREB1P16220 341 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 ATF6P18850 670 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 GIPC2Q8TF65 315 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 ZNF473Q8WTR7 871 aaKnown RBP18.97■□□□□ 0.63
TRIM41-202ENST00000351937 ATXN2LQ8WWM7 1075 aaKnown RBP18.97■□□□□ 0.63
TRIM41-202ENST00000351937 CELF6Q96J87 481 aaKnown RBP18.97■□□□□ 0.63
TRIM41-202ENST00000351937 TSGA13Q96PP4 275 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 UBE2OQ9C0C9 1292 aaKnown RBP18.97■□□□□ 0.63
TRIM41-202ENST00000351937 MARCH2Q9P0N8 246 aa18.97■□□□□ 0.63
TRIM41-202ENST00000351937 FOXO6A8MYZ6 492 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 RPL17P18621 184 aaKnown RBP18.96■□□□□ 0.63
TRIM41-202ENST00000351937 GRIA1P42261 906 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 MSH2P43246 934 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 TEX44Q53QW1 395 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 C10orf120Q5SQS8 335 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 ATP6V0D2Q8N8Y2 350 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 DPF3Q92784 378 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 CFAP36Q96G28 342 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 RC3H2Q9HBD1 1191 aaKnown RBP18.96■□□□□ 0.63
TRIM41-202ENST00000351937 FNIP2Q9P278 1114 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 HSFX1Q9UBD0 423 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 AFF4Q9UHB7 1163 aaKnown RBP18.96■□□□□ 0.63
TRIM41-202ENST00000351937 CARNS1A5YM72 827 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 WASH4PA8MWX3 477 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 TBX18O95935 607 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 KRT15P19012 456 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 CCNCP24863 283 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 EFTUD2Q15029 972 aaKnown RBP eCLIP18.96■□□□□ 0.631e-6■■■■□ 21.6
TRIM41-202ENST00000351937 ACBD5Q5T8D3 534 aaPredicted RBP18.96■□□□□ 0.63
TRIM41-202ENST00000351937 PIK3R6Q5UE93 754 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 ITPRIPL1Q6GPH6 555 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 ARHGAP12Q8IWW6 846 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 SLC39A11Q8N1S5 342 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 RTL3Q8N8U3 475 aaKnown RBP18.96■□□□□ 0.63
TRIM41-202ENST00000351937 BTN2A3PQ96KV6 586 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 CLSTN3Q9BQT9 956 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 KCNK9Q9NPC2 374 aa18.96■□□□□ 0.63
TRIM41-202ENST00000351937 LTBP2Q14767 1821 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 CSF2RAP15509 400 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 ITGB8P26012 769 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 PKN2Q16513 984 aaKnown RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 C14orf80Q86SX3 495 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 DEPDC1BQ8WUY9 529 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 MRRFQ96E11 262 aaKnown RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 TMEM169Q96HH4 297 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 CDK5RAP1Q96SZ6 601 aaKnown RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 TRIM43BA6NCK2 446 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 F5H423 210 aaPredicted RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 KIAA0355O15063 1070 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 ZBTB24O43167 697 aaPredicted RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 KPNA1P52294 538 aaPredicted RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 DEFB103AP81534 67 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 DSG1Q02413 1049 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 RING1Q06587 406 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 MIB1Q86YT6 1006 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 CMTR2Q8IYT2 770 aaKnown RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 ZNF276Q8N554 614 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 ZNF461Q8TAF7 563 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 DCAKDQ8WVC6 231 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 TRIM43Q96BQ3 446 aaPredicted RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 TEKT5Q96M29 485 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 GBA3Q9H227 469 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 PPARGC1AQ9UBK2 798 aaKnown RBP18.95■□□□□ 0.62
TRIM41-202ENST00000351937 MAD1L1Q9Y6D9 718 aa18.95■□□□□ 0.62
TRIM41-202ENST00000351937 GREB1Q4ZG55 1949 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 SDR42E2A6NKP2 422 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 ERI2A8K979 691 aaKnown RBP18.94■□□□□ 0.62
TRIM41-202ENST00000351937 DFFAO00273 331 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 C2CD2LO14523 706 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 ABLIM3O94929 683 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 FAM107AO95990 144 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 IGLV3-27P01718 113 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 MAGEA9P43362 315 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 WDR5P61964 334 aaKnown RBP18.94■□□□□ 0.62
TRIM41-202ENST00000351937 ZBTB17Q13105 803 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 MTA1Q13330 715 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 BTG3Q14201 252 aaPredicted RBP18.94■□□□□ 0.62
TRIM41-202ENST00000351937 KBTBD12Q3ZCT8 623 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 MS4A13Q5J8X5 152 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 AFMIDQ63HM1 303 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 TPGS2Q68CL5 300 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 LRRC49Q8IUZ0 686 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 ATPAF2Q8N5M1 289 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 ZSCAN18Q8TBC5 510 aaPredicted RBP18.94■□□□□ 0.62
TRIM41-202ENST00000351937 FAM107BQ9H098 131 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 CCDC134Q9H6E4 229 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 PRDM5Q9NQX1 630 aaPredicted RBP18.94■□□□□ 0.62
TRIM41-202ENST00000351937 DONSONQ9NYP3 566 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 TTLL3Q9Y4R7 772 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 IKBKGQ9Y6K9 419 aa18.94■□□□□ 0.62
TRIM41-202ENST00000351937 SUN1O94901 812 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms