RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ZBTB24O43167 697 aaPredicted RBP20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 UBOX5O94941 541 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 COL6A1P12109 1028 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 SELPP16109 830 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 HTR7P34969 479 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 ZNF33AQ06730 810 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 TEX44Q53QW1 395 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 FAM133BQ5BKY9 247 aaKnown RBP20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 MARK2Q7KZI7 788 aaKnown RBP20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 SCN4BQ8IWT1 228 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 FUBP3Q96I24 572 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 PIH1D1Q9NWS0 290 aaKnown RBP20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 SYBUQ9NX95 663 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 ABI2Q9NYB9 513 aaPredicted RBP20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 NEU3Q9UQ49 428 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 HMX2A2RU54 273 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 FKTNO75072 461 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 CCR1P32246 355 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 CD68P34810 354 aaPredicted RBP20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 APLP1P51693 650 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 NIPAL4Q0D2K0 466 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 BMPR2Q13873 1038 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 CRYMQ14894 314 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 FBXW10Q5XX13 1052 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 ITPRIPL1Q6GPH6 555 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 OTOAQ7RTW8 1153 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 ABI1Q8IZP0 508 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 FITM2Q8N6M3 262 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 SH3TC2Q8TF17 1288 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 CDKL2Q92772 493 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 DPF3Q92784 378 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 IQCGQ9H095 443 aaKnown RBP20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 TMEM161AQ9NX61 479 aa20.87■□□□□ 0.93
CHRNA3-202ENST00000348639 TADA2AO75478 443 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 SRGAP2BP0DMP2 458 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 PGFP49763 221 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 VEGFBP49765 207 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 COG7P83436 770 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 CCDC15Q0P6D6 951 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 ZBTB17Q13105 803 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 NAB1Q13506 487 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 NFE2Q16621 373 aaPredicted RBP20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 KCTD11Q693B1 232 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 RWDD4Q6NW29 188 aaKnown RBP20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 TIFABQ6ZNK6 161 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 CASP10Q92851 521 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 AGAP3Q96P47 875 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 SIK2Q9H0K1 926 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 SFMBT1Q9UHJ3 866 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 PHF24Q9UPV7 400 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 USH1CQ9Y6N9 552 aa20.86■□□□□ 0.93
CHRNA3-202ENST00000348639 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 SYN3O14994 580 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 NBNO60934 754 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 PAGE1O75459 146 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 HOXC13P31276 330 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 MAP2K2P36507 400 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 PPP2R5DQ14738 602 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 MROH9Q5TGP6 573 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 CDHR3Q6ZTQ4 885 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 CEP57Q86XR8 500 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 UNC5BQ8IZJ1 945 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 DBF4BQ8NFT6 615 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 OR52K1Q8NGK4 314 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 ZSCAN18Q8TBC5 510 aaPredicted RBP20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 TEKT5Q96M29 485 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 NMUR1Q9HB89 426 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 PLLPQ9Y342 182 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 POLBP06746 335 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 BNIP1Q12981 228 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 MANEALQ5VSG8 457 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 ZNF449Q6P9G9 518 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 STKLD1Q8NE28 680 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 CELF6Q96J87 481 aaKnown RBP20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 C8orf48Q96LL4 319 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 CASS4Q9NQ75 786 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 TMEM51Q9NW97 253 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 SCML2Q9UQR0 700 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 PCDHB7Q9Y5E2 793 aa20.85■□□□□ 0.93
CHRNA3-202ENST00000348639 A0A1W2PQH9 124 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 FGF10O15520 208 aaPredicted RBP20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 MSI1O43347 362 aaKnown RBP20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 SERPINB4P48594 390 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 ARHGEF6Q15052 776 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 SPANXN3Q5MJ09 141 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 FYB2Q5VWT5 728 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 MON1AQ86VX9 555 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 NUP93Q8N1F7 819 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 PTPRN2Q92932 1015 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 TSGA13Q96PP4 275 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 ELAC1Q9H777 363 aaKnown RBP20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 SLC40A1Q9NP59 571 aa20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 ALG13Q9NP73 1137 aaKnown RBP20.84■□□□□ 0.93
CHRNA3-202ENST00000348639 RASSF9O75901 435 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 NFKB1P19838 968 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 OLIG2Q13516 323 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 VARS2Q5ST30 1063 aaKnown RBP20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 SDHAF4Q5VUM1 108 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 LZTR1Q8N653 840 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms