RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 PDGFRAP16234 1089 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 NOVA1P51513 510 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 COPB1P53618 953 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 JAM2P57087 298 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 RNASE9P60153 205 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 POLR2FP61218 127 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 ST8SIA6P61647 398 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 NOMO3P69849 1222 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 MYL5Q02045 173 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 GFPT1Q06210 699 aaPredicted RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 AUHQ13825 339 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 HNRNPA1L2Q32P51 320 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 WDR45BQ5MNZ6 344 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 RABGAP1LQ5R372 815 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 SYCP2LQ5T4T6 812 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 FAM102AQ5T9C2 384 aaPredicted RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 SH3PXD2AQ5TCZ1 1133 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 DCAF12L1Q5VU92 463 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 CXorf57Q6NSI4 855 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 TRNP1Q6NT89 227 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 SASS6Q6UVJ0 657 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 ZCCHC9Q8N567 271 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 CADM4Q8NFZ8 388 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 DNASE2BQ8WZ79 361 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 IGSF8Q969P0 613 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 RPRD1AQ96P16 312 aaPredicted RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 NPY6RQ99463 290 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 NUP58Q9BVL2 599 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 GTPBP2Q9BX10 602 aaKnown RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 ANLNQ9NQW6 1124 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
CLCC1-202ENST00000348264 SUN2Q9UH99 717 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 SLC12A6Q9UHW9 1150 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 VANGL2Q9ULK5 521 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 ERVW-1Q9UQF0 538 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 HS3ST4Q9Y661 456 aa13.72□□□□□ -0.21
CLCC1-202ENST00000348264 ITIH6Q6UXX5 1313 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 PAGE1O75459 146 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 MOCS3O95396 460 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 ADCY5O95622 1261 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 MBD3O95983 291 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 MZF1P28698 734 aaPredicted RBP13.71□□□□□ -0.21
CLCC1-202ENST00000348264 ACSL1P33121 698 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 FLT3P36888 993 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 SCNN1AP37088 669 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 STK19P49842 368 aaPredicted RBP13.71□□□□□ -0.21
CLCC1-202ENST00000348264 SULT1E1P49888 294 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 ECT2LQ008S8 904 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 FKBP15Q5T1M5 1219 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 TTC39BQ5VTQ0 682 aaPredicted RBP13.71□□□□□ -0.21
CLCC1-202ENST00000348264 NAA35Q5VZE5 725 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 ZNF776Q68DI1 518 aaPredicted RBP13.71□□□□□ -0.21
CLCC1-202ENST00000348264 C14orf80Q86SX3 495 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 ERICH1Q86X53 443 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 DHX40Q8IX18 779 aaKnown RBP13.71□□□□□ -0.21
CLCC1-202ENST00000348264 MINDY1Q8N5J2 469 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 KDM1BQ8NB78 822 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 OR52K2Q8NGK3 314 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 CPA5Q8WXQ8 436 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 NT5C3BQ969T7 300 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 C18orf8Q96DM3 657 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 RPL10LQ96L21 214 aaKnown RBP13.71□□□□□ -0.21
CLCC1-202ENST00000348264 TBCBQ99426 244 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 RSPH9Q9H1X1 276 aaPredicted RBP13.71□□□□□ -0.21
CLCC1-202ENST00000348264 HSD3B7Q9H2F3 369 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 C6orf106Q9H6K1 298 aaPredicted RBP13.71□□□□□ -0.21
CLCC1-202ENST00000348264 NLRC4Q9NPP4 1024 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 SUSD2Q9UGT4 822 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 SLCO3A1Q9UIG8 710 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 STAP1Q9ULZ2 295 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 SLCO1B1Q9Y6L6 691 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 PLXNA2O75051 1894 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 TMEM131Q92545 1883 aa13.71□□□□□ -0.21
CLCC1-202ENST00000348264 LGALS16A8MUM7 142 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 METTL12A8MUP2 240 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 GOLGA8SH3BPF8 625 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 ARHGAP33O14559 1287 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 DNTTP04053 509 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 TPM2P07951 284 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 SRPRAP08240 638 aaKnown RBP13.7□□□□□ -0.22
CLCC1-202ENST00000348264 ZNF18P17022 549 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 CHRNB2P17787 502 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 PMLP29590 882 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 SOX5P35711 763 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 CXCR3P49682 368 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 ATXN3P54252 364 aaPredicted RBP13.7□□□□□ -0.22
CLCC1-202ENST00000348264 FMO1Q01740 532 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 ZBTB16Q05516 673 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 ARID5BQ14865 1188 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 NCAPHQ15003 741 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 SYCP1Q15431 976 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 TTC31Q49AM3 519 aaPredicted RBP13.7□□□□□ -0.22
CLCC1-202ENST00000348264 C9orf64Q5T6V5 341 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 APTXQ7Z2E3 356 aaKnown RBP13.7□□□□□ -0.22
CLCC1-202ENST00000348264 DEFB124Q8NES8 71 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 PGAP3Q96FM1 320 aaPredicted RBP13.7□□□□□ -0.22
CLCC1-202ENST00000348264 TKTL2Q9H0I9 626 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms