RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 DUSP28Q4G0W2 176 aa15.06■□□□□ 0
NUP50-201ENST00000347635 RNF220Q5VTB9 566 aa15.06■□□□□ 0
NUP50-201ENST00000347635 RFWD3Q6PCD5 774 aa15.06■□□□□ 0
NUP50-201ENST00000347635 ZBTB49Q6ZSB9 765 aa15.06■□□□□ 0
NUP50-201ENST00000347635 CHSY1Q86X52 802 aa15.06■□□□□ 0
NUP50-201ENST00000347635 PCDHB8Q9UN66 801 aa15.06■□□□□ 0
NUP50-201ENST00000347635 SNCAIPQ9Y6H5 919 aa15.06■□□□□ 0
NUP50-201ENST00000347635 NPY2RP49146 381 aa15.05■□□□□ 0
NUP50-201ENST00000347635 CDH17Q12864 832 aa15.05■□□□□ 0
NUP50-201ENST00000347635 ARHGAP15Q53QZ3 475 aa15.05■□□□□ 0
NUP50-201ENST00000347635 SLC51AQ86UW1 340 aa15.05■□□□□ 0
NUP50-201ENST00000347635 SNRNP27Q8WVK2 155 aaKnown RBP15.05■□□□□ 0
NUP50-201ENST00000347635 DLG3Q92796 817 aa15.05■□□□□ 0
NUP50-201ENST00000347635 RMDN1Q96DB5 314 aa15.05■□□□□ 0
NUP50-201ENST00000347635 DDX18Q9NVP1 670 aaKnown RBP15.05■□□□□ 0
NUP50-201ENST00000347635 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.05■□□□□ 0
NUP50-201ENST00000347635 TNFSF13BQ9Y275 285 aa15.05■□□□□ 0
NUP50-201ENST00000347635 LRCH4O75427 683 aa15.05■□□□□ -0
NUP50-201ENST00000347635 ALDH2P05091 517 aa15.05■□□□□ -0
NUP50-201ENST00000347635 KLRC2P26717 231 aa15.05■□□□□ -0
NUP50-201ENST00000347635 SH3D19Q5HYK7 790 aa15.05■□□□□ -0
NUP50-201ENST00000347635 SPDYAQ5MJ70 313 aa15.05■□□□□ -0
NUP50-201ENST00000347635 ZNF280DQ6N043 979 aa15.05■□□□□ -0
NUP50-201ENST00000347635 GSTCDQ8NEC7 633 aa15.05■□□□□ -0
NUP50-201ENST00000347635 BHLHE22Q8NFJ8 381 aaPredicted RBP15.05■□□□□ -0
NUP50-201ENST00000347635 CD101Q93033 1021 aa15.05■□□□□ -0
NUP50-201ENST00000347635 ULK4Q96C45 1275 aa15.05■□□□□ -0
NUP50-201ENST00000347635 VPS50Q96JG6 964 aa15.05■□□□□ -0
NUP50-201ENST00000347635 GPR88Q9GZN0 384 aa15.05■□□□□ -0
NUP50-201ENST00000347635 DMAP1Q9NPF5 467 aaPredicted RBP15.05■□□□□ -0
NUP50-201ENST00000347635 UBP1Q9NZI7 540 aa15.05■□□□□ -0
NUP50-201ENST00000347635 COL16A1Q07092 1604 aaPredicted RBP15.05■□□□□ -0
NUP50-201ENST00000347635 TBC1D4O60343 1298 aa15.05■□□□□ -0
NUP50-201ENST00000347635 TMCC1O94876 653 aa15.05■□□□□ -0
NUP50-201ENST00000347635 JCHAINP01591 159 aa15.05■□□□□ -0
NUP50-201ENST00000347635 CRHR1P34998 444 aa15.05■□□□□ -0
NUP50-201ENST00000347635 CACNB2Q08289 660 aaPredicted RBP15.05■□□□□ -0
NUP50-201ENST00000347635 AGKQ53H12 422 aa15.05■□□□□ -0
NUP50-201ENST00000347635 UNC5AQ6ZN44 842 aa15.05■□□□□ -0
NUP50-201ENST00000347635 AMIGO3Q86WK7 504 aa15.05■□□□□ -0
NUP50-201ENST00000347635 ADAM28Q9UKQ2 775 aa15.05■□□□□ -0
NUP50-201ENST00000347635 TMEM114B3SHH9 223 aa15.05■□□□□ -0
NUP50-201ENST00000347635 ZMPSTE24O75844 475 aa15.05■□□□□ -0
NUP50-201ENST00000347635 ESRRBO95718 433 aa15.05■□□□□ -0
NUP50-201ENST00000347635 TPH1P17752 444 aa15.05■□□□□ -0
NUP50-201ENST00000347635 SLC18A1P54219 525 aa15.05■□□□□ -0
NUP50-201ENST00000347635 SCARA3Q6AZY7 606 aa15.05■□□□□ -0
NUP50-201ENST00000347635 XYLT1Q86Y38 959 aa15.05■□□□□ -0
NUP50-201ENST00000347635 CDC26Q8NHZ8 85 aa15.05■□□□□ -0
NUP50-201ENST00000347635 FICDQ9BVA6 458 aa15.05■□□□□ -0
NUP50-201ENST00000347635 RNPEPQ9H4A4 650 aa15.05■□□□□ -0
NUP50-201ENST00000347635 HACD3Q9P035 362 aa15.05■□□□□ -0
NUP50-201ENST00000347635 BLOC1S6Q9UL45 172 aa15.05■□□□□ -0
NUP50-201ENST00000347635 XIAPP98170 497 aa15.04■□□□□ -0
NUP50-201ENST00000347635 CSHL1Q14406 222 aa15.04■□□□□ -0
NUP50-201ENST00000347635 CAPRIN1Q14444 709 aaKnown RBP15.04■□□□□ -0
NUP50-201ENST00000347635 LPCAT2Q7L5N7 544 aa15.04■□□□□ -0
NUP50-201ENST00000347635 RNF208Q9H0X6 261 aa15.04■□□□□ -0
NUP50-201ENST00000347635 ATP11BQ9Y2G3 1177 aa15.04■□□□□ -0
NUP50-201ENST00000347635 RBP1P09455 135 aa15.04■□□□□ -0
NUP50-201ENST00000347635 PKNOX1P55347 436 aa15.04■□□□□ -0
NUP50-201ENST00000347635 YWHAZP63104 245 aaKnown RBP15.04■□□□□ -0
NUP50-201ENST00000347635 POU5F1Q01860 360 aaKnown RBP15.04■□□□□ -0
NUP50-201ENST00000347635 B3GNT6Q6ZMB0 384 aa15.04■□□□□ -0
NUP50-201ENST00000347635 TAS2R42Q7RTR8 314 aa15.04■□□□□ -0
NUP50-201ENST00000347635 EGFL8Q99944 293 aa15.04■□□□□ -0
NUP50-201ENST00000347635 GRIP2Q9C0E4 1043 aa15.04■□□□□ -0
NUP50-201ENST00000347635 PRDM16Q9HAZ2 1276 aa15.04■□□□□ -0
NUP50-201ENST00000347635 KIF17Q9P2E2 1029 aa15.04■□□□□ -0
NUP50-201ENST00000347635 ITGA2BP08514 1039 aa15.04■□□□□ -0
NUP50-201ENST00000347635 PSMB4P28070 264 aa15.04■□□□□ -0
NUP50-201ENST00000347635 ADIGQ0VDE8 80 aa15.04■□□□□ -0
NUP50-201ENST00000347635 DGKZQ13574 1117 aa15.04■□□□□ -0
NUP50-201ENST00000347635 ZBTB41Q5SVQ8 909 aa15.04■□□□□ -0
NUP50-201ENST00000347635 ABHD15Q6UXT9 468 aa15.04■□□□□ -0
NUP50-201ENST00000347635 TMC7Q7Z402 723 aa15.04■□□□□ -0
NUP50-201ENST00000347635 LRRN4Q8WUT4 740 aa15.04■□□□□ -0
NUP50-201ENST00000347635 CERS2Q96G23 380 aa15.04■□□□□ -0
NUP50-201ENST00000347635 WDR41Q9HAD4 459 aa15.04■□□□□ -0
NUP50-201ENST00000347635 APOBEC3GQ9HC16 384 aaKnown RBP15.04■□□□□ -0
NUP50-201ENST00000347635 TSR3Q9UJK0 312 aaKnown RBP15.04■□□□□ -0
NUP50-201ENST00000347635 PAIP2BQ9ULR5 123 aaKnown RBP15.04■□□□□ -0
NUP50-201ENST00000347635 PCDHGC3Q9UN70 934 aa15.04■□□□□ -0
NUP50-201ENST00000347635 PEX11AO75192 247 aa15.04■□□□□ -0
NUP50-201ENST00000347635 USP1O94782 785 aa15.04■□□□□ -0
NUP50-201ENST00000347635 URODP06132 367 aa15.04■□□□□ -0
NUP50-201ENST00000347635 EFL1Q7Z2Z2 1120 aaKnown RBP15.04■□□□□ -0
NUP50-201ENST00000347635 DEFB106AQ8N104 65 aa15.04■□□□□ -0
NUP50-201ENST00000347635 FNIP1Q8TF40 1166 aa15.04■□□□□ -0
NUP50-201ENST00000347635 RMND5BQ96G75 393 aaPredicted RBP15.04■□□□□ -0
NUP50-201ENST00000347635 SERAC1Q96JX3 654 aa15.04■□□□□ -0
NUP50-201ENST00000347635 ZNF570Q96NI8 536 aa15.04■□□□□ -0
NUP50-201ENST00000347635 SPON2Q9BUD6 331 aa15.04■□□□□ -0
NUP50-201ENST00000347635 UNKQ9C0B0 810 aaKnown RBP15.04■□□□□ -0
NUP50-201ENST00000347635 S100A14Q9HCY8 104 aa15.04■□□□□ -0
NUP50-201ENST00000347635 KCNK1O00180 336 aa15.03■□□□□ -0
NUP50-201ENST00000347635 ALBP02768 609 aa15.03■□□□□ -0
NUP50-201ENST00000347635 MAP3K7CLP57077 242 aa15.03■□□□□ -0
NUP50-201ENST00000347635 C10orf107Q8IVU9 208 aa15.03■□□□□ -0
NUP50-201ENST00000347635 CLPTM1LQ96KA5 538 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms