RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SEMA3BQ13214 749 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 GRB14Q14449 540 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 TPSAB1Q15661 275 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SEPT7Q16181 437 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SLC25A52Q3SY17 297 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SLC9B1Q4ZJI4 515 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 HEATR6Q6AI08 1181 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CD300LGQ6UXG3 332 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 TEX9Q8N6V9 391 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF781Q8N8C0 355 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CCNYQ8ND76 341 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 HASPINQ8TF76 798 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SCG3Q8WXD2 468 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SPATA13Q96N96 652 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 BRD8Q9H0E9 1235 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 TNFRSF12AQ9NP84 129 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CCL15-CCL14A0A0B4J2E2 113 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 TRDMT1O14717 391 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 PDE5AO76074 875 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 PSMG1O95456 288 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 PROCP04070 461 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF865P0CJ78 1059 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ERCC2P18074 760 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 HDCP19113 662 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 NMBRP28336 390 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 IDH3AP50213 366 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CCL15Q16663 113 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 PPM1LQ5SGD2 360 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SNX30Q5VWJ9 437 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 KCTD11Q693B1 232 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 FSTL4Q6MZW2 842 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 DPP9Q86TI2 863 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 LRRTM3Q86VH5 581 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 DCLK2Q8N568 766 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SCAMP5Q8TAC9 235 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ALKBH8Q96BT7 664 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 PCED1BQ96HM7 432 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 C7orf26Q96N11 449 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 THTPAQ9BU02 230 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 DUSP16Q9BY84 665 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ULBP1Q9BZM6 244 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 VTA1Q9NP79 307 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 GDAP2Q9NXN4 497 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CPSF2Q9P2I0 782 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 IKBKGQ9Y6K9 419 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF236Q9UL36 1845 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 LOC100653049A0A140TA62 436 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 A6NJR5 290 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 CCDC22O60826 627 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 KRT34O76011 436 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 MT-CYBP00156 380 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 F2P00734 622 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 TROVE2P10155 538 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ESRRAP11474 423 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 NEFHP12036 1026 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 P4HA1P13674 534 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 TSHRP16473 764 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PTPN1P18031 435 aaKnown RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 TKTL1P51854 596 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SNAPC2Q13487 334 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ITGA9Q13797 1035 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 BLMHQ13867 455 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 FYB2Q5VWT5 728 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 LRRC8BQ6P9F7 803 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 RIPOR1Q6ZS17 1223 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 FASTKD5Q7L8L6 764 aaKnown RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 KDELC2Q7Z4H8 507 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 MAP7D3Q8IWC1 876 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SLC7A14Q8TBB6 771 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF398Q8TD17 642 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 USP33Q8TEY7 942 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SLC10A4Q96EP9 437 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PPP1R10Q96QC0 940 aaKnown RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 OR52B2Q96RD2 323 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 FTHL17Q9BXU8 183 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 KIAA1257Q9ULG3 409 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 GABRDO14764 452 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 MGEA5O60502 916 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 KRT37O76014 449 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 IL1BP01584 269 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SLC1A6P48664 564 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 BCAT1P54687 386 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 YBX1P67809 324 aaKnown RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ZBTB16Q05516 673 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 DLG1Q12959 904 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 KRT72Q14CN4 511 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 DGKDQ16760 1214 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 HSP90AA5PQ58FG0 334 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF789Q5FWF6 425 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 RNF220Q5VTB9 566 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 FRMD7Q6ZUT3 714 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 RAPH1Q70E73 1250 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ULK2Q8IYT8 1036 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 LRRC52Q8N7C0 313 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SHCBP1Q8NEM2 672 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PYDC1Q8WXC3 89 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 FAM161BQ96MY7 647 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms