RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 SF3B1O75533 1304 aaKnown RBP eCLIP17.6■□□□□ 0.41
SMARCC2-202ENST00000347471 SDR42E2A6NKP2 422 aa17.6■□□□□ 0.41
SMARCC2-202ENST00000347471 SLC4A1P02730 911 aa17.6■□□□□ 0.41
SMARCC2-202ENST00000347471 PPP1R14CQ8TAE6 165 aa17.6■□□□□ 0.41
SMARCC2-202ENST00000347471 OLFM3Q96PB7 478 aa17.6■□□□□ 0.41
SMARCC2-202ENST00000347471 TMEM39AQ9NV64 488 aa17.6■□□□□ 0.41
SMARCC2-202ENST00000347471 BFARQ9NZS9 450 aa17.6■□□□□ 0.41
SMARCC2-202ENST00000347471 SLC26A11Q86WA9 606 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 CHSY1Q86X52 802 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 PAF1Q8N7H5 531 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 ZNF784Q8NCA9 323 aaPredicted RBP17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 ZNF317Q96PQ6 595 aaPredicted RBP17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 CCSER2Q9H7U1 834 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 MARCH2Q9P0N8 246 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 FDFT1P37268 417 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 NR1H3Q13133 447 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 POU6F1Q14863 301 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 RASSF3Q86WH2 238 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 GSDMBQ8TAX9 411 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 DCAKDQ8WVC6 231 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 ZBBXA8MT70 800 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 E7ESA3 106 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 GARSP41250 739 aaKnown RBP17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 EMC10Q5UCC4 262 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 NDUFAF2Q8N183 169 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 ARMC2Q8NEN0 867 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 AZIN2Q96A70 460 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 SIGLEC10Q96LC7 697 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 SPON2Q9BUD6 331 aa17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 RBM22Q9NW64 420 aaKnown RBP eCLIP17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 RCOR3Q9P2K3 495 aaPredicted RBP17.59■□□□□ 0.41
SMARCC2-202ENST00000347471 HACD1B0YJ81 288 aa17.58■□□□□ 0.41
SMARCC2-202ENST00000347471 SMAPO00193 183 aa17.58■□□□□ 0.41
SMARCC2-202ENST00000347471 GALTP07902 379 aa17.58■□□□□ 0.41
SMARCC2-202ENST00000347471 ACRP10323 421 aa17.58■□□□□ 0.41
SMARCC2-202ENST00000347471 LGSNQ5TDP6 509 aa17.58■□□□□ 0.41
SMARCC2-202ENST00000347471 CKAP2Q8WWK9 683 aa17.58■□□□□ 0.41
SMARCC2-202ENST00000347471 NTAN1Q96AB6 310 aa17.58■□□□□ 0.41
SMARCC2-202ENST00000347471 MECRQ9BV79 373 aa17.58■□□□□ 0.41
SMARCC2-202ENST00000347471 PGGT1BP53609 377 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 PARP6Q2NL67 630 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 PM20D1Q6GTS8 502 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 CDKL2Q92772 493 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 TBC1D31Q96DN5 1066 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 MFSD3Q96ES6 412 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 SLC9A7Q96T83 725 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 UNKQ9C0B0 810 aaKnown RBP17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 SLC39A8Q9C0K1 460 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 VPS11Q9H270 941 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 CYP4F11Q9HBI6 524 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 FNDC3AQ9Y2H6 1198 aaKnown RBP17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 FAM163BP0C2L3 166 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 RFWD3Q6PCD5 774 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 ZNF534Q76KX8 674 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 MON1AQ86VX9 555 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 NPAS4Q8IUM7 802 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 SGSM3Q96HU1 749 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 CASD1Q96PB1 797 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 TTPALQ9BTX7 342 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 FSD1LQ9BXM9 530 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 RRN3Q9NYV6 651 aa17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 MARCOQ9UEW3 520 aaPredicted RBP17.58■□□□□ 0.4
SMARCC2-202ENST00000347471 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 TCEA3O75764 348 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 CNTN5O94779 1100 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 KITP10721 976 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 SEMA5AQ13591 1074 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 GPNMBQ14956 572 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 PLEKHG4Q58EX7 1191 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 HSP90AA5PQ58FG0 334 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 C16orf46Q6P387 395 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 ADGRD1Q6QNK2 874 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 ZCWPW1Q9H0M4 648 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 ABCF3Q9NUQ8 709 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 HS3ST4Q9Y661 456 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 E9PAM4 449 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 DNM1LO00429 736 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 SNRPAP09012 282 aaKnown RBP17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 PRPSAP1Q14558 356 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 SPATA21Q7Z572 469 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 SLC44A1Q8WWI5 657 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 SERPINB11Q96P15 392 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 NPHS2Q9NP85 383 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 SMG5Q9UPR3 1016 aaKnown RBP17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 PHF24Q9UPV7 400 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 MTMR11A4FU01 709 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 KRT38O76015 456 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 SUN1O94901 812 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 CCNB1P14635 433 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 PAFAH1B3Q15102 231 aaKnown RBP17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 SPRED3Q2MJR0 410 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 PSTKQ8IV42 348 aaKnown RBP17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 FBXO44Q9H4M3 255 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 CATSPERBQ9H7T0 1116 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 NT5MQ9NPB1 228 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 CHRAC1Q9NRG0 131 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 KLHL14Q9P2G3 628 aa17.57■□□□□ 0.4
SMARCC2-202ENST00000347471 GRID1Q9ULK0 1009 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms