RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 EPCAMP16422 314 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 TACR2P21452 398 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 CHKAP35790 457 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 GARSP41250 739 aaKnown RBP11.28□□□□□ -0.6
ECM1-201ENST00000346569 MAGEA6P43360 314 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 ZXDBP98169 803 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 PPM1LQ5SGD2 360 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 ANKRD20A2Q5SQ80 823 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 FAM182AQ5T1J6 154 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 ANKRD20A1Q5TYW2 823 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 ANKRD20A3Q5VUR7 823 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 ALS2CLQ60I27 953 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 RAP1GAP2Q684P5 730 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
ECM1-201ENST00000346569 HOOK3Q86VS8 718 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 RELL1Q8IUW5 271 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 LRRC49Q8IUZ0 686 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 PPIL6Q8IXY8 311 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 RTL3Q8N8U3 475 aaKnown RBP11.28□□□□□ -0.6
ECM1-201ENST00000346569 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 ADAMTS19Q8TE59 1207 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 SLC39A8Q9C0K1 460 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 EPB41L4BQ9H329 900 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 STOML2Q9UJZ1 356 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 VANGL2Q9ULK5 521 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 MYO7AQ13402 2215 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 NUP205Q92621 2012 aa11.28□□□□□ -0.6
ECM1-201ENST00000346569 A0A0A0MRY4 1105 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 TCRBV7S3A2A0A539 114 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 GFRA2O00451 464 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 CCL16O15467 120 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 MOSPD3O75425 235 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 RFPL2O75678 378 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 METTL18O95568 372 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 POU2F2P09086 479 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 HNRNPA1P09651 372 aaKnown RBP eCLIP11.27□□□□□ -0.6
ECM1-201ENST00000346569 PTPN2P17706 415 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 PFKLP17858 780 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 HDCP19113 662 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 CCNCP24863 283 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 CDC25CP30307 473 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 SLC6A4P31645 630 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 HSD17B3P37058 310 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 CCR2P41597 374 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 HARS2P49590 506 aaKnown RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 IRAK1P51617 712 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 SLC7A9P82251 487 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 AP1B1Q10567 949 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 KCNJ11Q14654 390 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 SLMAPQ14BN4 828 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 ALFQ53S48 1182 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 ANKRD22Q5VYY1 191 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 ELMOD1Q8N336 334 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 ZCCHC9Q8N567 271 aaKnown RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 CCNYQ8ND76 341 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 MRPS31Q92665 395 aaKnown RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 PRCCQ92733 491 aaPredicted RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 PWWP2AQ96N64 755 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 SPATA13Q96N96 652 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 LMAN2LQ9H0V9 348 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 SEMA4AQ9H3S1 761 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 ETNK1Q9HBU6 452 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 MAN1C1Q9NR34 630 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 DONSONQ9NYP3 566 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 DNMT3BQ9UBC3 853 aaKnown RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 AGO1Q9UL18 857 aaKnown RBP11.27□□□□□ -0.6
ECM1-201ENST00000346569 SHOC2Q9UQ13 582 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 ATP8A1Q9Y2Q0 1164 aa11.27□□□□□ -0.6
ECM1-201ENST00000346569 PRUNE2Q8WUY3 3088 aa11.27□□□□□ -0.61
ECM1-201ENST00000346569 VCANP13611 3396 aa11.27□□□□□ -0.61
ECM1-201ENST00000346569 PER2O15055 1255 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 ALOX15BO15296 676 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CHADO15335 359 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 MTSS1O43312 755 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 MAFKO60675 156 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 LATS1O95835 1130 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 MBL2P11226 248 aaPredicted RBP11.26□□□□□ -0.61
ECM1-201ENST00000346569 CORO1AP31146 461 aaKnown RBP11.26□□□□□ -0.61
ECM1-201ENST00000346569 ACTN2P35609 894 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 SLC11A2P49281 568 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 NDST2P52849 883 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 PMS2P54278 862 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CYP4F8P98187 520 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 KCNC3Q14003 757 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 TEX44Q53QW1 395 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 ADGRF1Q5T601 910 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 Q6ZNB5 142 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CHSY1Q86X52 802 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 DENND1CQ8IV53 801 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 ZNF567Q8N184 647 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 CORO1BQ9BR76 489 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 SLC46A2Q9BY10 475 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 NACA2Q9H009 215 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 NKX2-4Q9H2Z4 354 aa11.26□□□□□ -0.61
ECM1-201ENST00000346569 PABPC3Q9H361 631 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms