RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 KCNMB4Q86W47 210 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 WDR48Q8TAF3 677 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 PLEKHG4BQ96PX9 1271 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 GPN1Q9HCN4 374 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-201ENST00000345617 ASTN2O75129 1339 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-201ENST00000345617 F5H5T6 163 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 KHDRBS3O75525 346 aaKnown RBP19.73■□□□□ 0.75
HDAC4-201ENST00000345617 TDRD10Q5VZ19 366 aaKnown RBP19.73■□□□□ 0.75
HDAC4-201ENST00000345617 PLA2G12BQ9BX93 195 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 TMEM138Q9NPI0 162 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 DLG5Q8TDM6 1919 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 A0A087X0T9 212 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 FAM228BP0C875 321 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 SLC44A2Q8IWA5 706 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-201ENST00000345617 SPIRE2Q8WWL2 714 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 DGCR6LQ9BY27 220 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 TRHDEQ9UKU6 1024 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 RHAGQ02094 409 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 TAS2R13Q9NYV9 303 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 MINPP1Q9UNW1 487 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 BAIAP2Q9UQB8 552 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 INVSQ9Y283 1065 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 UBE2E3Q969T4 207 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 GDF3Q9NR23 364 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 OVOS2A0A0J9YW53 1432 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 OVOS2Q6IE36 1432 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 PTSQ03393 145 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 STOX1Q6ZVD7 989 aa19.73■□□□□ 0.75
HDAC4-201ENST00000345617 CACNA1CQ13936 2221 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 CCDC166P0CW27 439 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 MINDY2Q8NBR6 621 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 TRPV3Q8NET8 790 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 RPL14P50914 215 aaKnown RBP19.72■□□□□ 0.75
HDAC4-201ENST00000345617 OXCT1P55809 520 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 CHPFQ8IZ52 775 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 SPPL2AQ8TCT8 520 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 TCP10LQ8TDR4 215 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 SKA1Q96BD8 255 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 SLC9A7Q96T83 725 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 PCDHGC5Q9Y5F6 944 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 KPNA5O15131 536 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 RAVER2Q9HCJ3 691 aaKnown RBP19.72■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF222Q9UK12 451 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF12P17014 697 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 GLRBP48167 497 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 RPS6KA3P51812 740 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 TTLL6Q8N841 843 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 PNMA8BQ9ULN7 279 aaPredicted RBP19.72■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.72■□□□□ 0.75
HDAC4-201ENST00000345617 ERN1O75460 977 aaKnown RBP19.72■□□□□ 0.75
HDAC4-201ENST00000345617 SERPINA6P08185 405 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 KLK7P49862 253 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 PRKCEQ02156 737 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF177Q13360 481 aaPredicted RBP19.72■□□□□ 0.75
HDAC4-201ENST00000345617 ARHGAP15Q53QZ3 475 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 PYDC2Q56P42 97 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 GJD3Q8N144 294 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 POLD4Q9HCU8 107 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 RAD17O75943 681 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 TAF6P49848 677 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 VBP1P61758 197 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 EMC1Q8N766 993 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 TMC2Q8TDI7 906 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 SLIT1O75093 1534 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 EGFRP00533 1210 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 PLIN5Q00G26 463 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 C11orf96Q7Z7L8 435 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 WRNIP1Q96S55 665 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 MTMR4Q9NYA4 1195 aa19.72■□□□□ 0.75
HDAC4-201ENST00000345617 ABHD2P08910 425 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 C10orf120Q5SQS8 335 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 ZNF549Q6P9A3 640 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 ERVK-10P10266 1014 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 DDR1Q08345 913 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 LPIN1Q14693 890 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 VN1R5Q7Z5H4 357 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 LDHDQ86WU2 507 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 PIWIL2Q8TC59 973 aaKnown RBP19.71■□□□□ 0.75
HDAC4-201ENST00000345617 EMC3Q9P0I2 261 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 RRN3P2A6NIE6 340 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 DENND5AQ6IQ26 1287 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 ACMSDQ8TDX5 336 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 ACOT12Q8WYK0 555 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 TP53INP1Q96A56 240 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 MCCC1Q96RQ3 725 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-201ENST00000345617 ZCWPW1Q9H0M4 648 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 CYP3A43Q9HB55 503 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 CYP24A1Q07973 514 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 HECTD3Q5T447 861 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 RP9Q8TA86 221 aaKnown RBP19.71■□□□□ 0.75
HDAC4-201ENST00000345617 NUDT12Q9BQG2 462 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 PCNAP12004 261 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 PRR23CQ6ZRP0 262 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 TMEM121Q9BTD3 319 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 NCF1BA6NI72 391 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-201ENST00000345617 NCF1CA8MVU1 366 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-201ENST00000345617 GLI1P08151 1106 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 NCF1P14598 390 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-201ENST00000345617 ERVK-24P63145 666 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 DDIT4Q9NX09 232 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms