RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TBC1D3EA0A087X179 549 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3KA0A087X1G2 549 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3FA6NER0 549 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3LB9A6J9 549 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 O00370 1275 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 KRT16P08779 473 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3HP0C7X1 549 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 CYBAP13498 195 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 MIIPQ5JXC2 388 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3GQ6DHY5 549 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3CQ6IPX1 549 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3Q8IZP1 549 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 PNKPQ96T60 521 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 GMIPQ9P107 970 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 OPLAHO14841 1288 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 RPN2P04844 631 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 IQCF3P0C7M6 154 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 OR56A5P0C7T3 313 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 SULT2A1Q06520 285 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 MGAT5Q09328 741 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 PHKG1Q16816 387 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 C15orf59Q2T9L4 293 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 NHSL1Q5SYE7 1610 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 C5orf58C9J3I9 102 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 E2F6O75461 281 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 RBP1P09455 135 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 MARK2Q7KZI7 788 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 OTOP3Q7RTS5 596 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 C1orf127Q8N9H9 656 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 DUS2Q9NX74 493 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 ERI2A8K979 691 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 ZNF865P0CJ78 1059 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 COL6A1P12109 1028 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 SETMARQ53H47 684 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TMEM159Q96B96 161 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 MAGEB10Q96LZ2 347 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 ADA2Q9NZK5 511 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 A0A1W2PRU2 124 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 MTA2O94776 668 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 GATMP50440 423 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 SLC10A6Q3KNW5 377 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 TRMT11Q7Z4G4 463 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 NKX2-4Q9H2Z4 354 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 FZD8Q9H461 694 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 CDYLQ9Y232 598 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 PTPN7P35236 360 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 TBX2Q13207 712 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 MPP3Q13368 585 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 MAMDC4Q6UXC1 1216 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 ZBED3Q96IU2 234 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 SELENONQ9NZV5 590 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 MEFVO15553 781 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 EPB42P16452 691 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 CES1P23141 567 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 TGM3Q08188 693 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 SLC29A2Q14542 456 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 LPIN1Q14693 890 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 SNCBQ16143 134 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 NYAP1Q6ZVC0 841 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 STRA8Q7Z7C7 330 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 C11orf96Q7Z7L8 435 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 IRGQQ8WZA9 623 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 ADGRA2Q96PE1 1338 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 HALP42357 657 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 NOMO3P69849 1222 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 PPP1R15BQ5SWA1 713 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 GRAMD4Q6IC98 578 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 LCLAT1Q6UWP7 414 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 RRM2BQ7LG56 351 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 PTAR1Q7Z6K3 402 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 CASP10Q92851 521 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 ABCG4Q9H172 646 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 ATP13A3Q9H7F0 1226 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 COPS7BQ9H9Q2 264 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 ARHGEF4Q9NR80 690 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 PPFIA2O75334 1257 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 RFC1P35251 1148 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 POU6F1Q14863 301 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 PARP6Q2NL67 630 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 PANX3Q96QZ0 392 aa16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 PABPC3Q9H361 631 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 KIAA1522Q9P206 1035 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-201ENST00000344626 A0A1W2PQH9 124 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 E2F8A0AVK6 867 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 CST3P01034 146 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 EPHX1P07099 455 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 CXorf38Q8TB03 319 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 C4BPAP04003 597 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 GJA1P17302 382 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 FSHRP23945 695 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 SPANXN3Q5MJ09 141 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 CFAP52Q8N1V2 620 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 CPQQ9Y646 472 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 ENPP3O14638 875 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 CILPO75339 1184 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 RARAP10276 462 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 CYP2A7P20853 494 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms