RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 USP33Q8TEY7 942 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 TBC1D31Q96DN5 1066 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 SIGLEC10Q96LC7 697 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 ZNF512Q96ME7 567 aaPredicted RBP13.93□□□□□ -0.18
CDC42-202ENST00000344548 ROPN1BQ9BZX4 212 aaPredicted RBP13.93□□□□□ -0.18
CDC42-202ENST00000344548 ROPN1Q9HAT0 212 aaPredicted RBP13.93□□□□□ -0.18
CDC42-202ENST00000344548 GKN1Q9NS71 199 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 A0A087WUV0 522 aaPredicted RBP13.93□□□□□ -0.18
CDC42-202ENST00000344548 C2orf78A6NCI8 922 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 MAFKO60675 156 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 BAIAP3O94812 1187 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 JCHAINP01591 159 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 HTRA4P83105 476 aaPredicted RBP13.93□□□□□ -0.18
CDC42-202ENST00000344548 PLD1Q13393 1074 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 RAB33AQ14088 237 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 TMEM240Q5SV17 173 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 TMEM150AQ86TG1 271 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 C1orf74Q96LT6 269 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 MCOLN1Q9GZU1 580 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 PSD3Q9NYI0 1048 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 DOCK4Q8N1I0 1966 aa13.93□□□□□ -0.18
CDC42-202ENST00000344548 EXOC1LA0A1B0GW35 172 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 COCHO43405 550 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 OPHN1O60890 802 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 SHOX2O60902 331 aaPredicted RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 FGBP02675 491 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 URODP06132 367 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 CNPP09543 421 aaKnown RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 CAPN2P17655 700 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 PSEN1P49768 467 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 PPP2R2AP63151 447 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 TWF1Q12792 350 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 STAT4Q14765 748 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 KLHL23Q8NBE8 558 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 MAML1Q92585 1016 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 TTC25Q96NG3 672 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 PRMT1Q99873 361 aaKnown RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 CAPS2Q9BXY5 557 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 UBP1Q9NZI7 540 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 KLHL8Q9P2G9 620 aaPredicted RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 TCRBV9S1A1TA0A576 114 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 E7EVH7 732 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 SCAMP3O14828 347 aaKnown RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 EIF3HO15372 352 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDC42-202ENST00000344548 KLKB1P03952 638 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 TPSB2P20231 275 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 GNGT1P63211 74 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 MPP2Q14168 576 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 TPSAB1Q15661 275 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 PARP6Q2NL67 630 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 TEX44Q53QW1 395 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 RFWD3Q6PCD5 774 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 PDZD4Q76G19 769 aaPredicted RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 OTOP3Q7RTS5 596 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 PALM2Q8IXS6 379 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 RTL3Q8N8U3 475 aaKnown RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 ATP11CQ8NB49 1132 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 MCUQ8NE86 351 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 ARHGEF2Q92974 986 aaKnown RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 XPO6Q96QU8 1125 aaKnown RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 SLC22A12Q96S37 553 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 MLPHQ9BV36 600 aaPredicted RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 PHACTR1Q9C0D0 580 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 KIF9Q9HAQ2 790 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 ZNF334Q9HCZ1 680 aaPredicted RBP13.92□□□□□ -0.18
CDC42-202ENST00000344548 ZNF212Q9UDV6 495 aa13.92□□□□□ -0.18
CDC42-202ENST00000344548 PLXNA4Q9HCM2 1894 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 SMAPO00193 183 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 EFCAB14O75071 495 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 AGTP01019 485 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 APOEP02649 317 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 NFKB1P19838 968 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 SLC6A4P31645 630 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 CA8P35219 290 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 SERPINB6P35237 376 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 PAPOLAP51003 745 aaKnown RBP13.91□□□□□ -0.18
CDC42-202ENST00000344548 ZNF135P52742 658 aaPredicted RBP13.91□□□□□ -0.18
CDC42-202ENST00000344548 ZXDBP98169 803 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 NRG1Q02297 640 aaPredicted RBP13.91□□□□□ -0.18
CDC42-202ENST00000344548 PDE4DIPQ5VU43 2346 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 AFMIDQ63HM1 303 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 TPGS2Q68CL5 300 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 DNAJB7Q7Z6W7 309 aaPredicted RBP13.91□□□□□ -0.18
CDC42-202ENST00000344548 UNC5BQ8IZJ1 945 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 CFAP52Q8N1V2 620 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 CFAP36Q96G28 342 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 DOCK6Q96HP0 2047 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 BTN2A3PQ96KV6 586 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 MYRFLQ96LU7 910 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 CYP2S1Q96SQ9 504 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 ALG13Q9NP73 1137 aaKnown RBP13.91□□□□□ -0.18
CDC42-202ENST00000344548 SMYD2Q9NRG4 433 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 MRPL17Q9NRX2 175 aaKnown RBP13.91□□□□□ -0.18
CDC42-202ENST00000344548 OLA1Q9NTK5 396 aaKnown RBP13.91□□□□□ -0.18
CDC42-202ENST00000344548 COMMD8Q9NX08 183 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 IGSF9Q9P2J2 1179 aa13.91□□□□□ -0.18
CDC42-202ENST00000344548 IGLV3-10A0A075B6K4 115 aa13.9□□□□□ -0.18
CDC42-202ENST00000344548 PRRG1O14668 218 aa13.9□□□□□ -0.18
CDC42-202ENST00000344548 TRDMT1O14717 391 aaKnown RBP13.9□□□□□ -0.18
CDC42-202ENST00000344548 NDC80O14777 642 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms