RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 IRF6O14896 467 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 MTA2O94776 668 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 F7P08709 466 aaPredicted RBP12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 NAMPTP43490 491 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 SLC7A2P52569 658 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 NDST1P52848 882 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 POLD3Q15054 466 aaPredicted RBP12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 PTPN20Q4JDL3 420 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 PACS1Q6VY07 963 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 P3H2Q8IVL5 708 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 LRRC39Q96DD0 335 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 BTBD9Q96Q07 612 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 SCN3BQ9NY72 215 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 UTP6Q9NYH9 597 aaKnown RBP12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 NR2E3Q9Y5X4 410 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 DGKBQ9Y6T7 804 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 TFPTP0C1Z6 253 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 CCDC166P0CW27 439 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 PCNAP12004 261 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 CKMT2P17540 419 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 TNFSF9P41273 254 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 CGB2Q6NT52 195 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 DNAJC14Q6Y2X3 702 aaPredicted RBP12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 OFCC1Q8IZS5 231 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 URGCPQ8TCY9 931 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 HERPUD2Q9BSE4 406 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 SNX15Q9NRS6 342 aa12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.78□□□□□ -0.36
SSX2IP-201ENST00000342203 BIRC5O15392 142 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 FOXD2O60548 495 aaPredicted RBP12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 PGAM1P18669 254 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 CHRNA5P30532 468 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 AGAP9Q5VTM2 703 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 HERC6Q8IVU3 1022 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 KCTD4Q8WVF5 259 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 SH3GL1Q99961 368 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 OSBPL11Q9BXB4 747 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 ABCB10Q9NRK6 738 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 DDIT4Q9NX09 232 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 TMX2Q9Y320 296 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 C9JVG2 144 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 E5RI56 91 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 STX16-NPEPL1H3BU86 382 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 BOLA2-SMG1P6H3BVE0 249 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 TRIM38O00635 465 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 ITM2AO43736 263 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 CSH1P0DML2 217 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 CSH2P0DML3 217 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 IL1R1P14778 569 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 ARPP19P56211 112 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 HPCAP84074 193 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 FBXO27Q8NI29 283 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 DNAJB14Q8TBM8 379 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 FNIP1Q8TF40 1166 aa12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 C6orf62Q9GZU0 229 aaPredicted RBP12.77□□□□□ -0.36
SSX2IP-201ENST00000342203 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 CXorf49A8MYA2 514 aaPredicted RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 TAF4O00268 1085 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 TSPAN3O60637 253 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 DEFA1P59665 94 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 DEFA3P59666 94 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 PLEKHG4Q58EX7 1191 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 RNF19BQ6ZMZ0 732 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 ZNF781Q8N8C0 355 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 NRG4Q8WWG1 115 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 BORCS5Q969J3 196 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 CERS2Q96G23 380 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 SPON2Q9BUD6 331 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 SNRNP25Q9BV90 132 aaKnown RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 CNGB3Q9NQW8 809 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 TMEM216Q9P0N5 145 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 DSEQ9UL01 958 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 BNIP3LO60238 219 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 WDR47O94967 919 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 JAK1P23458 1154 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 GRTP1Q5TC63 336 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 TMEM198Q66K66 360 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 WDR49Q8IV35 697 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 ATPAF2Q8N5M1 289 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 GMCL1P1Q8NEA9 526 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 RP9Q8TA86 221 aaKnown RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 LRTOMTQ8WZ04 291 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 MAGEB5Q9BZ81 275 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 ASPSCR1Q9BZE9 553 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 WRAP73Q9P2S5 460 aaPredicted RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 GOLGA8CPA6NN73 597 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 J3QRK9 145 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 MAGEB3O15480 346 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 DLDP09622 509 aaKnown RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 NCAM1P13591 858 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 XRCC1P18887 633 aaPredicted RBP12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 BBS5Q8N3I7 341 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 FBXL8Q96CD0 374 aa12.77□□□□□ -0.37
SSX2IP-201ENST00000342203 COQ10BQ9H8M1 238 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms