RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 BTBD10Q9BSF8 475 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 COLEC11Q9BWP8 271 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 MYL2P10916 166 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 PGAM1P18669 254 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 ATP6V1C1P21283 382 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 IFRD2Q12894 506 aaPredicted RBP20.62■□□□□ 0.89
SPG7-202ENST00000341316 ANO7Q6IWH7 933 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 SERINC5Q86VE9 423 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 TEX9Q8N6V9 391 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 STKLD1Q8NE28 680 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 PGAP3Q96FM1 320 aaPredicted RBP20.62■□□□□ 0.89
SPG7-202ENST00000341316 DCLRE1BQ9H816 532 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 CHST12Q9NRB3 414 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 ZFATQ9P243 1243 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 KLHL8Q9P2G9 620 aaPredicted RBP20.62■□□□□ 0.89
SPG7-202ENST00000341316 GIT1Q9Y2X7 761 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 PTCH2Q9Y6C5 1203 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 A6NHS1 94 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 GSRP00390 522 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 POMCP01189 267 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 TMPRSS15P98073 1019 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 TTC7BQ86TV6 843 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 OR52K1Q8NGK4 314 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 E2F7Q96AV8 911 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 SMARCD1Q96GM5 515 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 FCRL3Q96P31 734 aaPredicted RBP20.61■□□□□ 0.89
SPG7-202ENST00000341316 XPNPEP3Q9NQH7 507 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 TMLHEQ9NVH6 421 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 LMNAP02545 664 aaKnown RBP20.61■□□□□ 0.89
SPG7-202ENST00000341316 ERVK-10P10266 1014 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 CD52P31358 61 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 GCKP35557 465 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 BRCC3P46736 316 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 AIF1P55008 147 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 IRX4P78413 519 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 ZBTB16Q05516 673 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 CRHR2Q13324 411 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 C16orf46Q6P387 395 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 NUDCD3Q8IVD9 361 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 HASPINQ8TF76 798 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 NSL1Q96IY1 281 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 CSNK1G1Q9HCP0 422 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 EMCNQ9ULC0 261 aa20.61■□□□□ 0.89
SPG7-202ENST00000341316 MTO1Q9Y2Z2 717 aaKnown RBP20.61■□□□□ 0.89
SPG7-202ENST00000341316 TPP1O14773 563 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 GSC2O15499 205 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 ZBTB24O43167 697 aaPredicted RBP20.6■□□□□ 0.89
SPG7-202ENST00000341316 BPGMP07738 259 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 CYBAP13498 195 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 CD68P34810 354 aaPredicted RBP20.6■□□□□ 0.89
SPG7-202ENST00000341316 CCNHP51946 323 aaPredicted RBP20.6■□□□□ 0.89
SPG7-202ENST00000341316 SESN3P58005 492 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 OCRLQ01968 901 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 PPIDQ08752 370 aaKnown RBP20.6■□□□□ 0.89
SPG7-202ENST00000341316 CD300LGQ6UXG3 332 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 MRPL10Q7Z7H8 261 aaKnown RBP20.6■□□□□ 0.89
SPG7-202ENST00000341316 RSPH3Q86UC2 560 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 TMEM209Q96SK2 561 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 FERMT1Q9BQL6 677 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 ARHGAP39Q9C0H5 1083 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 TKTL2Q9H0I9 626 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 SCN10AQ9Y5Y9 1956 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 CCDC189A1A4V9 331 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 KPNA6O60684 536 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 DNAJC6O75061 913 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 BDNFP23560 247 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 GMPRP36959 345 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 HCAR3P49019 387 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 TRIM32Q13049 653 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 ZBTB17Q13105 803 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 PDE1CQ14123 709 aaPredicted RBP20.6■□□□□ 0.89
SPG7-202ENST00000341316 CMPK2Q5EBM0 449 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 ZCCHC23Q6ZST2 131 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 DNAJC9Q8WXX5 260 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 TRIB2Q92519 343 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 C7orf26Q96N11 449 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 NMRK2Q9NPI5 230 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 PADI3Q9ULW8 664 aa20.6■□□□□ 0.89
SPG7-202ENST00000341316 GYG2O15488 501 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 B3GAT3O94766 335 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 PDHA1P08559 390 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 F7P08709 466 aaPredicted RBP20.59■□□□□ 0.89
SPG7-202ENST00000341316 LINGO3P0C6S8 592 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 CNTFP26441 200 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 RPL9P32969 192 aaKnown RBP20.59■□□□□ 0.89
SPG7-202ENST00000341316 CXCR3P49682 368 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 RINLQ6ZS11 566 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 ALYREFQ86V81 257 aaKnown RBP20.59■□□□□ 0.89
SPG7-202ENST00000341316 TUBB6Q9BUF5 446 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 WDCPQ9H6R7 721 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 OR12D3Q9UGF7 316 aa20.59■□□□□ 0.89
SPG7-202ENST00000341316 UPP2O95045 317 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 ACADSP16219 412 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 PCSK1P29120 753 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 THPOP40225 353 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 TSNAXIP1Q2TAA8 658 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 TAC4Q86UU9 113 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 LRRTM3Q86VH5 581 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 CCNJLQ8IV13 435 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 LMNTD2Q8IXW0 634 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms