RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 NELFEP18615 380 aaKnown RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 BGNP21810 368 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 COMTP21964 271 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 IFNA8P32881 189 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 ICAM3P32942 547 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 ETV3P41162 512 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 CDH15P55291 814 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 GNA12Q03113 381 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 XKR3Q5GH77 459 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 CYP4A22Q5TCH4 519 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 GPR141Q7Z602 305 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 SETD3Q86TU7 594 aaPredicted RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 HEATR4Q86WZ0 1026 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 HPS6Q86YV9 775 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 GALNT13Q8IUC8 556 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
RTN3-203ENST00000341307 C12orf56Q8IXR9 622 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 GABPB2Q8TAK5 448 aaPredicted RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 OSCP1Q8WVF1 389 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 POMGNT1Q8WZA1 660 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 CD101Q93033 1021 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 HHIPL1Q96JK4 782 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 CFAP57Q96MR6 1250 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 COG8Q96MW5 612 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 INO80BQ9C086 356 aaPredicted RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 HOXD1Q9GZZ0 328 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 ANLNQ9NQW6 1124 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 RIC8BQ9NVN3 520 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 THAP1Q9NVV9 213 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 KCNK4Q9NYG8 393 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 DNMT3BQ9UBC3 853 aaKnown RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 CENPBD1B2RD01 187 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 SPOPO43791 374 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 IL1BP01584 269 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 ADCY8P40145 1251 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 THOP1P52888 689 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 NKX2-5P52952 324 aaPredicted RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 ALDH18A1P54886 795 aaKnown RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 GALNT2Q10471 571 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 NOGQ13253 232 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 CCNG2Q16589 344 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 AARS2Q5JTZ9 985 aaKnown RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 PLEKHA7Q6IQ23 1121 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 CYP4V2Q6ZWL3 525 aaPredicted RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 CENPUQ71F23 418 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 ATG4AQ8WYN0 398 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 NTPCRQ9BSD7 190 aaKnown RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 C10orf88Q9H8K7 445 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 CCDC177Q9NQR7 707 aaPredicted RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 SEPT11Q9NVA2 429 aaKnown RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 RIMS3Q9UJD0 308 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 MYH9P35579 1960 aaKnown RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 CXCL11O14625 94 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 DDHD2O94830 711 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 ATG7O95352 703 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 BMP10O95393 424 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 PSMC3P17980 439 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 EDNRBP24530 442 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 IST1P53990 364 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 HADHBP55084 474 aaKnown RBP12.13□□□□□ -0.47
RTN3-203ENST00000341307 ADGRE1Q14246 886 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 HSDL1Q3SXM5 330 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 ZBED5Q49AG3 693 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 CEP78Q5JTW2 689 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 RARS2Q5T160 578 aaKnown RBP12.13□□□□□ -0.47
RTN3-203ENST00000341307 GPAT2Q6NUI2 795 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 FBXO16Q8IX29 292 aaPredicted RBP12.13□□□□□ -0.47
RTN3-203ENST00000341307 MCPH1Q8NEM0 835 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 BRSK1Q8TDC3 778 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 GIPC2Q8TF65 315 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 SEMA4DQ92854 862 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 IMPG2Q9BZV3 1241 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 PCDH12Q9NPG4 1184 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 EXOC7Q9UPT5 735 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 KCNH4Q9UQ05 1017 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 CROCCQ5TZA2 2017 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 TM9SF1O15321 606 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 CLDN3O15551 220 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 DHRS4L1P0CG22 281 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 GRM5P41594 1212 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 NR4A2P43354 598 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 ATP6V0D1P61421 351 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 PPIL2Q13356 520 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 FASTKD3Q14CZ7 662 aaKnown RBP12.13□□□□□ -0.47
RTN3-203ENST00000341307 EPC2Q52LR7 807 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 SGO2Q562F6 1265 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 ANKS1BQ7Z6G8 1248 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 RALGPS2Q86X27 583 aaPredicted RBP12.13□□□□□ -0.47
RTN3-203ENST00000341307 CHSY1Q86X52 802 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 CLIP4Q8N3C7 705 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 BANPQ8N9N5 519 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 SLC20A1Q8WUM9 679 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 COPS5Q92905 334 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 ZNF486Q96H40 463 aaPredicted RBP12.13□□□□□ -0.47
RTN3-203ENST00000341307 DOK1Q99704 481 aa12.13□□□□□ -0.47
RTN3-203ENST00000341307 PORCNQ9H237 461 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms