RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SERGEFQ9UGK8 458 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 DDX25Q9UHL0 483 aaKnown RBP11.75□□□□□ -0.53
ATXN3-201ENST00000340660 FBXO10Q9UK96 956 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 UBQLN1Q9UMX0 589 aaKnown RBP11.75□□□□□ -0.53
ATXN3-201ENST00000340660 SH3BP1Q9Y3L3 701 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 KCNMB2Q9Y691 235 aa11.75□□□□□ -0.53
ATXN3-201ENST00000340660 RP1P56715 2156 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 K7ESM1 405 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 CYB561D2O14569 222 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 NKX2-8O15522 239 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 DUX1O43812 170 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 ABL1P00519 1130 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 DNTTP04053 509 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 ALPPL2P10696 532 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 CD1EP15812 388 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 ETV5P41161 510 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 LEPRP48357 1165 aaKnown RBP11.74□□□□□ -0.53
ATXN3-201ENST00000340660 HDAC4P56524 1084 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 KRTAP10-9P60411 292 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 PDIA5Q14554 519 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 NUGGCQ68CJ6 796 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 CDH24Q86UP0 819 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 GLIS1Q8NBF1 620 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 MCPH1Q8NEM0 835 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 PKMYT1Q99640 499 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 TARS2Q9BW92 718 aaKnown RBP11.74□□□□□ -0.53
ATXN3-201ENST00000340660 WDR35Q9P2L0 1181 aa11.74□□□□□ -0.53
ATXN3-201ENST00000340660 NSD1Q96L73 2696 aaPredicted RBP11.74□□□□□ -0.53
ATXN3-201ENST00000340660 MAP1AP78559 2803 aaPredicted RBP11.74□□□□□ -0.53
ATXN3-201ENST00000340660 TTC26A0AVF1 554 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.73□□□□□ -0.53
ATXN3-201ENST00000340660 PRSS44E7EML9 344 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 GREM1O60565 184 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 PIAS2O75928 621 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 NEBLO76041 1014 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 PDGFAP04085 211 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 JMJD7P0C870 316 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 PRKAR1AP10644 381 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 EFNA5P52803 228 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 MFAP3P55082 362 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 TSPY1Q01534 308 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 ZBTB16Q05516 673 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 SERPINA13PQ6UXR4 307 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 ZNF366Q8N895 744 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 BICD2Q8TD16 824 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 HAS1Q92839 578 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 ZBTB45Q96K62 511 aaPredicted RBP11.73□□□□□ -0.53
ATXN3-201ENST00000340660 HSD17B14Q9BPX1 270 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 TTLL2Q9BWV7 592 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 LRRC2Q9BYS8 371 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 CHMP4BQ9H444 224 aaKnown RBP11.73□□□□□ -0.53
ATXN3-201ENST00000340660 PLK2Q9NYY3 685 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 SLC27A6Q9Y2P4 619 aa11.73□□□□□ -0.53
ATXN3-201ENST00000340660 EME2A4GXA9 379 aaPredicted RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 ZNF891A8MT65 544 aaPredicted RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 NTN3O00634 580 aaPredicted RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 COCHO43405 550 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 PRICKLE3O43900 615 aaPredicted RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 SORBS2O94875 1100 aaKnown RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 IRF1P10914 325 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 MCM5P33992 734 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 PTGER4P35408 488 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 CCR5P51681 352 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 MYL7Q01449 175 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 NRG1Q02297 640 aaPredicted RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 SPIDRQ14159 915 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 DEFB109BQ30KR1 87 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 TTC31Q49AM3 519 aaPredicted RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 C9orf57Q5W0N0 161 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 NAPEPLDQ6IQ20 393 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 C16orf46Q6P387 395 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 MOXD1Q6UVY6 613 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 MPZL3Q6UWV2 235 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 CAPN12Q6ZSI9 719 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 DTWD1Q8N5C7 304 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 UCMAQ8WVF2 138 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 USP7Q93009 1102 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 NKD1Q969G9 470 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 EIF2AK1Q9BQI3 630 aaKnown RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 PYM1Q9BRP8 204 aaKnown RBP11.72□□□□□ -0.53
ATXN3-201ENST00000340660 FOXP3Q9BZS1 431 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 SEMA6CQ9H3T2 930 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 LOXL2Q9Y4K0 774 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 MYH10P35580 1976 aa11.72□□□□□ -0.53
ATXN3-201ENST00000340660 K7ERI5 159 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 PIRO00625 290 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 JAK2O60674 1132 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 OAS2P29728 719 aaKnown RBP11.71□□□□□ -0.53
ATXN3-201ENST00000340660 TRAPPC10P48553 1259 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 NLRP5P59047 1200 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 CDC20Q12834 499 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 SEPT6Q14141 434 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 INPP5JQ15735 1006 aaPredicted RBP11.71□□□□□ -0.53
ATXN3-201ENST00000340660 FOXD4L6Q3SYB3 417 aaPredicted RBP11.71□□□□□ -0.53
ATXN3-201ENST00000340660 CFAP221Q4G0U5 840 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 APOA5Q6Q788 366 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 FOXD4L3Q6VB84 417 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms