RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 COPS7BQ9H9Q2 264 aaPredicted RBP14.74□□□□□ -0.05
CPSF7-201ENST00000340437 BRWD3Q6RI45 1802 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 KIF3CO14782 793 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 USP2O75604 605 aaPredicted RBP14.74□□□□□ -0.05
CPSF7-201ENST00000340437 C22orf31O95567 290 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 VCLP18206 1134 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 POTEAQ6S8J7 498 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 ZNF567Q8N184 647 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 SLC35F5Q8WV83 523 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 CERS2Q96G23 380 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 CELF6Q96J87 481 aaKnown RBP14.74□□□□□ -0.05
CPSF7-201ENST00000340437 GCOM2Q9BZD3 368 aaPredicted RBP14.74□□□□□ -0.05
CPSF7-201ENST00000340437 IGKV6-21A0A0C4DH24 114 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 GSRP00390 522 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 ZNF460Q14592 562 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 TTLL4Q14679 1199 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 PNPLA1Q8N8W4 532 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.74□□□□□ -0.05
CPSF7-201ENST00000340437 CHRAC1Q9NRG0 131 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 MTMR10Q9NXD2 777 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 ARHGAP26Q9UNA1 814 aa14.74□□□□□ -0.05
CPSF7-201ENST00000340437 TK2O00142 265 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 PEX1O43933 1283 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 AOC1P19801 751 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 FAM219BQ5XKK7 198 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 MFN1Q8IWA4 741 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 SLC7A14Q8TBB6 771 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 QKIQ96PU8 341 aaKnown RBP eCLIP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 SETD4Q9NVD3 440 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 ZNF112Q9UJU3 913 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 ITGA11Q9UKX5 1188 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 DTNAQ9Y4J8 743 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 SLC4A7Q9Y6M7 1214 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 LGALS2P05162 132 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 ZFXP17010 805 aaPredicted RBP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 PGAM1P18669 254 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 NAGLUP54802 743 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 TUBB3Q13509 450 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 PDK3Q15120 406 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 LIN52Q52LA3 116 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 FSTL4Q6MZW2 842 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 PLPPR4Q7Z2D5 763 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 DNAJC1Q96KC8 554 aaKnown RBP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 LRGUKQ96M69 825 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 OSMRQ99650 979 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 TIMM13Q9Y5L4 95 aaPredicted RBP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 ARID2Q68CP9 1835 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 EEF2KO00418 725 aaKnown RBP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 MDM4O15151 490 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 GAS2O43903 313 aaKnown RBP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 TPSB2P20231 275 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 GP5P40197 560 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 FOLH1Q04609 750 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 KLF10Q13118 480 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 SEMA5AQ13591 1074 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 TPSAB1Q15661 275 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 SPATA24Q86W54 205 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 APOBEC3FQ8IUX4 373 aaKnown RBP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 RNF139Q8WU17 664 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 ARNTL2Q8WYA1 636 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 RNF34Q969K3 372 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 DCPSQ96C86 337 aaKnown RBP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 TSNARE1Q96NA8 513 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 NXF3Q9H4D5 531 aaKnown RBP14.73□□□□□ -0.05
CPSF7-201ENST00000340437 LRRC4Q9HBW1 653 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 TCF7L2Q9NQB0 619 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 BFARQ9NZS9 450 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 TLK1Q9UKI8 766 aa14.73□□□□□ -0.05
CPSF7-201ENST00000340437 CRABP2P29373 138 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 CNGA3Q16281 694 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 SYPL2Q5VXT5 272 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 PAOXQ6QHF9 649 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 LAYNQ6UX15 382 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 CXorf38Q8TB03 319 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 APBA2Q99767 749 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 SLC4A5Q9BY07 1137 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 PRM3Q9NNZ6 103 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 DDX18Q9NVP1 670 aaKnown RBP14.72□□□□□ -0.05
CPSF7-201ENST00000340437 BUD23O43709 281 aaKnown RBP14.72□□□□□ -0.05
CPSF7-201ENST00000340437 TSPAN1O60635 241 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 RPS12P25398 132 aaKnown RBP14.72□□□□□ -0.05
CPSF7-201ENST00000340437 ADCYAP1R1P41586 468 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 TBCCQ15814 346 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 CMPK2Q5EBM0 449 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 TMCO4Q5TGY1 634 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 PIGZQ86VD9 579 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 EXOC8Q8IYI6 725 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 NR1H4Q96RI1 486 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-201ENST00000340437 SEMA6AQ9H2E6 1030 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 ADA2Q9NZK5 511 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 CITO14578 2027 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 PRRC2BQ5JSZ5 2229 aaKnown RBP14.72□□□□□ -0.05
CPSF7-201ENST00000340437 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-201ENST00000340437 FAM72CH0Y354 149 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 C2P06681 752 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 CYP2C8P10632 490 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 SPRP35270 261 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-201ENST00000340437 SOX11P35716 441 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 DEUP1Q05D60 604 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 MSLNQ13421 630 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms