RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 IGFN1Q86VF2 1251 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 MMAAQ8IVH4 418 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 SLC38A6Q8IZM9 456 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 FIBCD1Q8N539 461 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ADCY4Q8NFM4 1077 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 CXorf38Q8TB03 319 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ZUFSPQ96AP4 578 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 FBXL8Q96CD0 374 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 CEP295NLQ96MC4 621 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 KLF6Q99612 283 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PKP2Q99959 881 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 FAM118BQ9BPY3 351 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 HOXD1Q9GZZ0 328 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 NAA50Q9GZZ1 169 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 DUS2Q9NX74 493 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ITGA11Q9UKX5 1188 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 RABL2BQ9UNT1 228 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 CARD8Q9Y2G2 431 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PCDHGA3Q9Y5H0 932 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 E7ESA3 106 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 GCATO75600 419 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 F2P00734 622 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 PROCP04070 461 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ZSCAN5DPP0CG00 497 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CCL5P13501 91 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 GLRA2P23416 452 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ARRB2P32121 409 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SREBF1P36956 1147 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FMO5P49326 533 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FLT3LGP49771 235 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ATP6V0D1P61421 351 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 YWHAGP61981 247 aaKnown RBP eCLIP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CENPCQ03188 943 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 BST1Q10588 318 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ATP1A4Q13733 1029 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 TFDP1Q14186 410 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 OASLQ15646 514 aaKnown RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CNGA3Q16281 694 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 NFIL3Q16649 462 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 GRAMD1BQ3KR37 738 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ZBED5Q49AG3 693 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FAM20CQ8IXL6 584 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 LSMEM2Q8N112 164 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 TTC39CQ8N584 583 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 LILRB4Q8NHJ6 448 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SNX29Q8TEQ0 813 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 NPLQ9BXD5 320 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ACSS3Q9H6R3 686 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 NANOGQ9H9S0 305 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 PLAC1Q9HBJ0 212 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 APEX2Q9UBZ4 518 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SLC30A1Q9Y6M5 507 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 KAT6AQ92794 2004 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FRYQ5TBA9 3013 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 H0YJX3 145 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SCO2O43819 266 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 INHAP05111 366 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ATP5BP06576 529 aaKnown RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ABCB1P08183 1280 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ETS1P14921 441 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ENPP1P22413 925 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 IDUAP35475 653 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 AQP5P55064 265 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CDH15P55291 814 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CNTN2Q02246 1040 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 DMPKQ09013 629 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 PEX6Q13608 980 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ALCAMQ13740 583 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CALCRLQ16602 461 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ASPRV1Q53RT3 343 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 AARS2Q5JTZ9 985 aaKnown RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FNBP1LQ5T0N5 605 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 DENND5BQ6ZUT9 1274 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CENPUQ71F23 418 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 Q8N9G6 341 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 GPRC5AQ8NFJ5 357 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 DDX1Q92499 740 aaKnown RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 TAMM41Q96BW9 452 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 APOPT1Q96IL0 206 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FEM1CQ96JP0 617 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 KLHL32Q96NJ5 620 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FAM111AQ96PZ2 611 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 PAFAH2Q99487 392 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 OLFM1Q99784 485 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 EPS15L1Q9UBC2 864 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 DKK3Q9UBP4 350 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SORCS3Q9UPU3 1222 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 A0A1W2PPW3 197 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CDK2AP1O14519 115 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SPOPO43791 374 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 LPXNO60711 386 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 NR3C1P04150 777 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 RPA1P27694 616 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SSTR1P30872 391 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 POLR2BP30876 1174 aaKnown RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 MAN1A1P33908 653 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 PHBP35232 272 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ALDH18A1P54886 795 aaKnown RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 MS4A2Q01362 244 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CHRNEQ04844 493 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms