RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 CLDN11O75508 207 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 RARAP10276 462 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 PABPC1P11940 636 aaKnown RBP17.22■□□□□ 0.35
SFN-201ENST00000339276 CXorf57Q6NSI4 855 aaKnown RBP17.22■□□□□ 0.35
SFN-201ENST00000339276 CCDC117Q8IWD4 279 aaPredicted RBP17.22■□□□□ 0.35
SFN-201ENST00000339276 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.22■□□□□ 0.35
SFN-201ENST00000339276 OR52K2Q8NGK3 314 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 TBC1D31Q96DN5 1066 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 LMLNQ96KR4 655 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 EPAS1Q99814 870 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 GOLPH3Q9H4A6 298 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.22■□□□□ 0.35
SFN-201ENST00000339276 HYOU1Q9Y4L1 999 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 ATG2BQ96BY7 2078 aa17.22■□□□□ 0.35
SFN-201ENST00000339276 CHRM1P11229 460 aaPredicted RBP17.21■□□□□ 0.35
SFN-201ENST00000339276 HOXC13P31276 330 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 TNFRSF4P43489 277 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 RPS9P46781 194 aaKnown RBP17.21■□□□□ 0.35
SFN-201ENST00000339276 NUMBP49757 651 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 KIF5AQ12840 1032 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 GAS6Q14393 721 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 HADHQ16836 314 aaKnown RBP17.21■□□□□ 0.35
SFN-201ENST00000339276 FUT11Q495W5 492 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 FBXO43Q4G163 708 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 BOLA3Q53S33 107 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 PPP6R3Q5H9R7 873 aaPredicted RBP17.21■□□□□ 0.35
SFN-201ENST00000339276 EMC10Q5UCC4 262 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 TMEM215Q68D42 235 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 PKN3Q6P5Z2 889 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 KIAA0907Q7Z7F0 614 aaPredicted RBP17.21■□□□□ 0.35
SFN-201ENST00000339276 PSTKQ8IV42 348 aaKnown RBP17.21■□□□□ 0.35
SFN-201ENST00000339276 AHI1Q8N157 1196 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 ZNF557Q8N988 423 aaPredicted RBP17.21■□□□□ 0.35
SFN-201ENST00000339276 TPCN2Q8NHX9 752 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 TEKT4Q8WW24 435 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 ZNF830Q96NB3 372 aaPredicted RBP17.21■□□□□ 0.35
SFN-201ENST00000339276 LRFN3Q9BTN0 628 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 CHRDQ9H2X0 955 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 ZDHHC4Q9NPG8 344 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 ZNF212Q9UDV6 495 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 HCN2Q9UL51 889 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 ZDBF2Q9HCK1 2354 aa17.21■□□□□ 0.35
SFN-201ENST00000339276 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.21■□□□□ 0.34
SFN-201ENST00000339276 MACROD2A1Z1Q3 448 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 GOT1P17174 413 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 COMTP21964 271 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 MZF1P28698 734 aaPredicted RBP17.21■□□□□ 0.34
SFN-201ENST00000339276 EPHB2P29323 1055 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 AVPR2P30518 371 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 CSKP41240 450 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 KIR2DL1P43626 348 aaPredicted RBP17.21■□□□□ 0.34
SFN-201ENST00000339276 NAP1L1P55209 391 aaKnown RBP17.21■□□□□ 0.34
SFN-201ENST00000339276 TPI1P60174 286 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 ZNF177Q13360 481 aaPredicted RBP17.21■□□□□ 0.34
SFN-201ENST00000339276 DPYSL2Q16555 572 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 ATP13A4Q4VNC1 1196 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 C11orf63Q6NUN7 778 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 NUDT18Q6ZVK8 323 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 ADIPOR2Q86V24 386 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 NLRP14Q86W24 1093 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 TXLNBQ8N3L3 684 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 SYNPOQ8N3V7 929 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 RPLP0P6Q8NHW5 317 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 WFIKKN2Q8TEU8 576 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 CIPCQ9C0C6 399 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 KLHL11Q9NVR0 708 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 KIAA1522Q9P206 1035 aaPredicted RBP17.21■□□□□ 0.34
SFN-201ENST00000339276 INTS6Q9UL03 887 aaKnown RBP17.21■□□□□ 0.34
SFN-201ENST00000339276 TBC1D30Q9Y2I9 924 aa17.21■□□□□ 0.34
SFN-201ENST00000339276 EEF2KO00418 725 aaKnown RBP17.2■□□□□ 0.34
SFN-201ENST00000339276 SPOPO43791 374 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 RHOCP08134 193 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 CCDC175P0C221 793 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 RHOQP17081 205 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 TIE1P35590 1138 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 SLC1A1P43005 524 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 CCDC173Q0VFZ6 552 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 C2orf27AQ580R0 203 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 PITRM1Q5JRX3 1037 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 EGFLAMQ63HQ2 1017 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 MBLAC2Q68D91 279 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 APCDD1Q8J025 514 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 USP33Q8TEY7 942 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 SORCS1Q8WY21 1168 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 PCDH18Q9HCL0 1135 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 NDFIP2Q9NV92 336 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 TMEM248Q9NWD8 314 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 ALG6Q9Y672 507 aa17.2■□□□□ 0.34
SFN-201ENST00000339276 MUC22E2RYF6 1773 aaPredicted RBP17.19■□□□□ 0.34
SFN-201ENST00000339276 MOCS3O95396 460 aa17.19■□□□□ 0.34
SFN-201ENST00000339276 CD48P09326 243 aa17.19■□□□□ 0.34
SFN-201ENST00000339276 TNNT1P13805 278 aa17.19■□□□□ 0.34
SFN-201ENST00000339276 OR1E1P30953 314 aa17.19■□□□□ 0.34
SFN-201ENST00000339276 MAGEA9P43362 315 aa17.19■□□□□ 0.34
SFN-201ENST00000339276 MTAPQ13126 283 aa17.19■□□□□ 0.34
SFN-201ENST00000339276 EIF4HQ15056 248 aaKnown RBP17.19■□□□□ 0.34
SFN-201ENST00000339276 PLEKHG6Q3KR16 790 aa17.19■□□□□ 0.34
SFN-201ENST00000339276 C6orf118Q5T5N4 469 aa17.19■□□□□ 0.34
SFN-201ENST00000339276 RNF219Q5W0B1 726 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms