RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CYBBP04839 570 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 COILP38432 576 aaPredicted RBP14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 EIF3EP60228 445 aaKnown RBP14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 ZNF33AQ06730 810 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 MPPE1Q53F39 396 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 HABP4Q5JVS0 413 aaKnown RBP14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 C8orf74Q6P047 294 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 KLHL7Q8IXQ5 586 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 CCDC105Q8IYK2 499 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 UMODL1-AS1Q8N2C9 162 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 DEFB123Q8N688 67 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 TDRD5Q8NAT2 981 aaKnown RBP14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 NOA1Q8NC60 698 aaKnown RBP14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 MYLIPQ8WY64 445 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 SUSD6Q92537 303 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 IGSF8Q969P0 613 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 KRT12Q99456 494 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 SAE1Q9UBE0 346 aaPredicted RBP14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 CDH22Q9UJ99 828 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 DRG1Q9Y295 367 aaKnown RBP14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 MYOFQ9NZM1 2061 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 RBP3P10745 1247 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 NDST2P52849 883 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 OASLQ15646 514 aaKnown RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 SYDE1Q6ZW31 735 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 OTOP3Q7RTS5 596 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 TFAP2DQ7Z6R9 452 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 CDKL3Q8IVW4 592 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 NPWQ8N729 165 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ZNF557Q8N988 423 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ATL2Q8NHH9 583 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 TMA16Q96EY4 203 aaKnown RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 POMKQ9H5K3 350 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 UBE2ZQ9H832 354 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ZFP14Q9HCL3 533 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ZNF212Q9UDV6 495 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 DNPEPQ9ULA0 475 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ZNF148Q9UQR1 794 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 USP15Q9Y4E8 981 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 NYNRINQ9P2P1 1898 aaKnown RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ECEL1O95672 775 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 OR1E1P30953 314 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ETFBP38117 255 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 YBEYP58557 167 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 RPS24P62847 133 aaKnown RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 DR1Q01658 176 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 GALNT2Q10471 571 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 SMAD4Q13485 552 aaKnown RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 SNX1Q13596 522 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 PARP15Q460N3 678 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ALFQ53S48 1182 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 SLC45A4Q5BKX6 768 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 C6orf118Q5T5N4 469 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 AFMIDQ63HM1 303 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 POTEHQ6S545 545 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 NPNTQ6UXI9 565 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 SETD3Q86TU7 594 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 MYRIPQ8NFW9 859 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 BPIFB1Q8TDL5 484 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 TFB1MQ8WVM0 346 aaKnown RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 UBXN4Q92575 508 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 CCDC114Q96M63 670 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 GUCD1Q96NT3 240 aa14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 QKIQ96PU8 341 aaKnown RBP eCLIP14.93□□□□□ -0.022e-11■■■■■ 42
NIPAL3-202ENST00000339255 THG1LQ9NWX6 298 aaKnown RBP14.93□□□□□ -0.02
NIPAL3-202ENST00000339255 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 H7C0C1 242 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 MTSS1O43312 755 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 RAMP2O60895 175 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 CNTN5O94779 1100 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 LAMP2P13473 410 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 KCNA5P22460 613 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 STIP1P31948 543 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 GBP2P32456 591 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 GARSP41250 739 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 ATP5OP48047 213 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 IRAK1P51617 712 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 OXCT1P55809 520 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 SLC10A2Q12908 348 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 ZNF177Q13360 481 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 SKIV2LQ15477 1246 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 TEX35Q5T0J7 233 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 RNF43Q68DV7 783 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 TTC27Q6P3X3 843 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 DARS2Q6PI48 645 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 ZNF783Q6ZMS7 281 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 MTSS1LQ765P7 747 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 Q7L0L9 218 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 CCDC117Q8IWD4 279 aaPredicted RBP14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 CFAP52Q8N1V2 620 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 LRRN4CLQ8ND94 238 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 RIN3Q8TB24 985 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 OSCP1Q8WVF1 389 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 HDAC11Q96DB2 347 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 MYADMQ96S97 322 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 KLC2Q9H0B6 622 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 AMACRQ9UHK6 382 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 TBC1D30Q9Y2I9 924 aa14.92□□□□□ -0.02
NIPAL3-202ENST00000339255 MFHAS1Q9Y4C4 1052 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms