RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SNX10Q9Y5X0 201 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 BRCA2P51587 3418 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 IGLV3-10A0A075B6K4 115 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 SUN1O94901 812 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 CSH1P0DML2 217 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 CSH2P0DML3 217 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 CSF2RAP15509 400 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 RHOQP17081 205 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 ATF6P18850 670 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 SSTR1P30872 391 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 PPP3CCP48454 512 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 EFEMP1Q12805 493 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 RAB33AQ14088 237 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 HP1BP3Q5SSJ5 553 aaPredicted RBP16.68■□□□□ 0.26
HPS1-202ENST00000338546 TIGD7Q6NT04 549 aaPredicted RBP16.68■□□□□ 0.26
HPS1-202ENST00000338546 ADGRD1Q6QNK2 874 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 FBF1Q8TES7 1133 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 LRRN4Q8WUT4 740 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 SIGLEC10Q96LC7 697 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 MYRFLQ96LU7 910 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 EBNA1BP2Q99848 306 aaKnown RBP16.68■□□□□ 0.26
HPS1-202ENST00000338546 TMEM106CQ9BVX2 250 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.68■□□□□ 0.26
HPS1-202ENST00000338546 ZC3H7BQ9UGR2 993 aaKnown RBP16.68■□□□□ 0.26
HPS1-202ENST00000338546 CHMP2BQ9UQN3 213 aa16.68■□□□□ 0.26
HPS1-202ENST00000338546 SDR42E2A6NKP2 422 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 ADAM12O43184 909 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 BANF1O75531 89 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 SOAT2O75908 522 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 CPP00450 1065 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 DNAJB2P25686 324 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 NDST2P52849 883 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 C10orf120Q5SQS8 335 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 IGDCC3Q8IVU1 814 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 KLHDC8BQ8IXV7 354 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 ZNF683Q8IZ20 524 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 UMODL1-AS1Q8N2C9 162 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 CCDC33Q8N5R6 958 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 DNAJC5GQ8N7S2 189 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 TRMT2BQ96GJ1 504 aaKnown RBP16.67■□□□□ 0.26
HPS1-202ENST00000338546 TEKT5Q96M29 485 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 XPO6Q96QU8 1125 aaKnown RBP16.67■□□□□ 0.26
HPS1-202ENST00000338546 GBA3Q9H227 469 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 CCDC134Q9H6E4 229 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 SSU72Q9NP77 194 aaKnown RBP16.67■□□□□ 0.26
HPS1-202ENST00000338546 IL23AQ9NPF7 189 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 PRDM5Q9NQX1 630 aaPredicted RBP16.67■□□□□ 0.26
HPS1-202ENST00000338546 SEPT10Q9P0V9 454 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 NUDT5Q9UKK9 219 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 SSX2IPQ9Y2D8 614 aa16.67■□□□□ 0.26
HPS1-202ENST00000338546 DRGXA6NNA5 263 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 POC1B-GALNT4F8VUJ3 575 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 CACNG3O60359 315 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 TLR5O60602 858 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 URODP06132 367 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 PRKCHP24723 683 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 ITGB8P26012 769 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 MSH2P43246 934 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 DEFB103AP81534 67 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 MS4A13Q5J8X5 152 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 PIK3R6Q5UE93 754 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 TRABD2AQ86V40 505 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 NLRP14Q86W24 1093 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 ARHGAP12Q8IWW6 846 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 TP53INP2Q8IXH6 220 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
HPS1-202ENST00000338546 GPR152Q8TDT2 470 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 AZIN2Q96A70 460 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 SELENOSQ9BQE4 189 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 ZYG11BQ9C0D3 744 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 TMEM248Q9NWD8 314 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 CTNNAL1Q9UBT7 734 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 DNMT3LQ9UJW3 386 aa16.66■□□□□ 0.26
HPS1-202ENST00000338546 MRPL42Q9Y6G3 142 aaKnown RBP16.66■□□□□ 0.26
HPS1-202ENST00000338546 TCRBV9S1A1TA0A576 114 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 RASA4BC9J798 803 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 KCNK1O00180 336 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 MATN3O15232 486 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 RASA4O43374 803 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 AVILO75366 819 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 AP2A1O95782 977 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 MOCS2O96007 188 aaPredicted RBP16.65■□□□□ 0.26
HPS1-202ENST00000338546 CHN1P15882 459 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 PSMB4P28070 264 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 ATP5C1P36542 298 aaKnown RBP16.65■□□□□ 0.26
HPS1-202ENST00000338546 IFNAR2P48551 515 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 PRPSAP1Q14558 356 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 STEAP4Q687X5 459 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 ZNF449Q6P9G9 518 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 CYP4X1Q8N118 509 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 AGGF1Q8N302 714 aaeCLIP16.65■□□□□ 0.26
HPS1-202ENST00000338546 PDCD7Q8N8D1 485 aaKnown RBP16.65■□□□□ 0.26
HPS1-202ENST00000338546 STKLD1Q8NE28 680 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 GIPC2Q8TF65 315 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 INTS9Q9NV88 658 aaKnown RBP16.65■□□□□ 0.26
HPS1-202ENST00000338546 RSPH14Q9UHP6 348 aa16.65■□□□□ 0.26
HPS1-202ENST00000338546 SLC12A8A0AV02 714 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 FAM155BO75949 473 aa16.64■□□□□ 0.25
HPS1-202ENST00000338546 BRAFP15056 766 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms