RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 BASP1P80723 227 aaKnown RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 DHX9Q08211 1270 aaKnown RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 GALNT2Q10471 571 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 CCDC25Q86WR0 208 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 CIR1Q86X95 450 aaPredicted RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 NUP205Q92621 2012 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 MYEOVQ96EZ4 313 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 ZFRQ96KR1 1074 aaKnown RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 DNMT3BQ9UBC3 853 aaKnown RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 AGO1Q9UL18 857 aaKnown RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 IGLV3-10A0A075B6K4 115 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 CCDC195A0A1B0GUA6 201 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 EPOPA6NHQ4 379 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 DRGXA6NNA5 263 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 TRDMT1O14717 391 aaKnown RBP15.09■□□□□ 0.01
CBX3-201ENST00000337620 SCAMP3O14828 347 aaKnown RBP15.09■□□□□ 0.01
CBX3-201ENST00000337620 HNRNPA1P09651 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
CBX3-201ENST00000337620 HOXA9P31269 272 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 SLC6A4P31645 630 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 GARSP41250 739 aaKnown RBP15.09■□□□□ 0.01
CBX3-201ENST00000337620 NRIP1P48552 1158 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 FAM133BQ5BKY9 247 aaKnown RBP15.09■□□□□ 0.01
CBX3-201ENST00000337620 HIBCHQ6NVY1 386 aaPredicted RBP15.09■□□□□ 0.01
CBX3-201ENST00000337620 PCGF5Q86SE9 256 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 NLRP14Q86W24 1093 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 CFAP52Q8N1V2 620 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 TSEN2Q8NCE0 465 aaKnown RBP15.09■□□□□ 0.01
CBX3-201ENST00000337620 TCEAL4Q96EI5 215 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 CEP41Q9BYV8 373 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 ATP8A1Q9Y2Q0 1164 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 OBSL1O75147 1896 aa15.09■□□□□ 0.01
CBX3-201ENST00000337620 TRAV19A0A0A6YYK7 116 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 C5orf60A6NFR6 353 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 WASH4PA8MWX3 477 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 KCNK1O00180 336 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 RFXAPO00287 272 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 ATP8B1O43520 1251 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 GCATO75600 419 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 STK10O94804 968 aaKnown RBP15.08■□□□□ 0.01
CBX3-201ENST00000337620 OLFM2O95897 454 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 RHOP08100 348 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 ZXDBP98169 803 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 PPIDQ08752 370 aaKnown RBP15.08■□□□□ 0.01
CBX3-201ENST00000337620 RNASEH2BQ5TBB1 312 aaKnown RBP15.08■□□□□ 0.01
CBX3-201ENST00000337620 RHBDF2Q6PJF5 856 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 TMC3Q7Z5M5 1100 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 ARHGAP12Q8IWW6 846 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 AZIN2Q96A70 460 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 HDAC11Q96DB2 347 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 PWWP2AQ96N64 755 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 SLC39A8Q9C0K1 460 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 BRD8Q9H0E9 1235 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 LMAN2LQ9H0V9 348 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 RAB6BQ9NRW1 208 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 TMEM248Q9NWD8 314 aa15.08■□□□□ 0.01
CBX3-201ENST00000337620 DOCK6Q96HP0 2047 aa15.08■□□□□ 0
CBX3-201ENST00000337620 CLUHO75153 1309 aa15.08■□□□□ 0
CBX3-201ENST00000337620 RNF103O00237 685 aa15.08■□□□□ 0
CBX3-201ENST00000337620 MAP2K7O14733 419 aa15.08■□□□□ 0
CBX3-201ENST00000337620 FGF19O95750 216 aa15.08■□□□□ 0
CBX3-201ENST00000337620 CHKAP35790 457 aa15.08■□□□□ 0
CBX3-201ENST00000337620 NTHL1P78549 312 aa15.08■□□□□ 0
CBX3-201ENST00000337620 MORF4L2Q15014 288 aa15.08■□□□□ 0
CBX3-201ENST00000337620 SYCP2LQ5T4T6 812 aa15.08■□□□□ 0
CBX3-201ENST00000337620 ADGRF1Q5T601 910 aa15.08■□□□□ 0
CBX3-201ENST00000337620 GPR158Q5T848 1215 aa15.08■□□□□ 0
CBX3-201ENST00000337620 ELMSAN1Q6PJG2 1045 aa15.08■□□□□ 0
CBX3-201ENST00000337620 ARHGEF18Q6ZSZ5 1173 aa15.08■□□□□ 0
CBX3-201ENST00000337620 PPIL6Q8IXY8 311 aa15.08■□□□□ 0
CBX3-201ENST00000337620 TDHQ8IZJ6 230 aa15.08■□□□□ 0
CBX3-201ENST00000337620 ATPAF2Q8N5M1 289 aa15.08■□□□□ 0
CBX3-201ENST00000337620 SHKBP1Q8TBC3 707 aa15.08■□□□□ 0
CBX3-201ENST00000337620 CPT1BQ92523 772 aa15.08■□□□□ 0
CBX3-201ENST00000337620 SLC46A2Q9BY10 475 aa15.08■□□□□ 0
CBX3-201ENST00000337620 PRKD2Q9BZL6 878 aa15.08■□□□□ 0
CBX3-201ENST00000337620 DNAJC17Q9NVM6 304 aaKnown RBP15.08■□□□□ 0
CBX3-201ENST00000337620 DONSONQ9NYP3 566 aa15.08■□□□□ 0
CBX3-201ENST00000337620 GOLGA8MH3BSY2 632 aa15.07■□□□□ 0
CBX3-201ENST00000337620 NDC80O14777 642 aa15.07■□□□□ 0
CBX3-201ENST00000337620 TSPAN3O60637 253 aa15.07■□□□□ 0
CBX3-201ENST00000337620 HSPA9P38646 679 aaKnown RBP15.07■□□□□ 0
CBX3-201ENST00000337620 EPHA5P54756 1037 aa15.07■□□□□ 0
CBX3-201ENST00000337620 TEAD2Q15562 447 aa15.07■□□□□ 0
CBX3-201ENST00000337620 ANKRD20A2Q5SQ80 823 aa15.07■□□□□ 0
CBX3-201ENST00000337620 FAXCQ5TGI0 409 aa15.07■□□□□ 0
CBX3-201ENST00000337620 ANKRD20A1Q5TYW2 823 aa15.07■□□□□ 0
CBX3-201ENST00000337620 ANKRD20A3Q5VUR7 823 aa15.07■□□□□ 0
CBX3-201ENST00000337620 ARHGAP36Q6ZRI8 547 aa15.07■□□□□ 0
CBX3-201ENST00000337620 GRASPQ7Z6J2 395 aaPredicted RBP15.07■□□□□ 0
CBX3-201ENST00000337620 CCDC13Q8IYE1 715 aa15.07■□□□□ 0
CBX3-201ENST00000337620 ADAMTS19Q8TE59 1207 aa15.07■□□□□ 0
CBX3-201ENST00000337620 ZDHHC7Q9NXF8 308 aa15.07■□□□□ 0
CBX3-201ENST00000337620 ZFP37Q9Y6Q3 630 aaPredicted RBP15.07■□□□□ 0
CBX3-201ENST00000337620 A0A0A0MRY4 1105 aa15.07■□□□□ 0
CBX3-201ENST00000337620 TNRC18O15417 2968 aaPredicted RBP15.07■□□□□ 0
CBX3-201ENST00000337620 OR1E1P30953 314 aa15.07■□□□□ 0
CBX3-201ENST00000337620 PAPOLAP51003 745 aaKnown RBP15.07■□□□□ 0
CBX3-201ENST00000337620 SLC7A9P82251 487 aa15.07■□□□□ 0
CBX3-201ENST00000337620 WASHC5Q12768 1159 aa15.07■□□□□ 0
CBX3-201ENST00000337620 DUSP6Q16828 381 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms