RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TM9SF1O15321 606 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 SPAG6O75602 509 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 MT-CYBP00156 380 aaPredicted RBP23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 ALDOAP04075 364 aaKnown RBP23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 SP3Q02447 781 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 CMC1Q7Z7K0 106 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 PNPLA1Q8N8W4 532 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 KLHL29Q96CT2 875 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 TSSK1BQ9BXA7 367 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 M0QZQ0 153 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 TBX18O95935 607 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 DHRS4L1P0CG22 281 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 USP46P62068 366 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 RNF43Q68DV7 783 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 LRRC8BQ6P9F7 803 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 CCDC91Q7Z6B0 441 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 SCD5Q86SK9 330 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 SPATA2LQ8IUW3 424 aaPredicted RBP23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 ACSS2Q9NR19 701 aa23.69■■□□□ 1.38
CLPTM1-201ENST00000337392 UNC80Q8N2C7 3258 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 FAM237BA0A1B0GVD1 139 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 STK10O94804 968 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 TSHRP16473 764 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 FDFT1P37268 417 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 PARP6Q2NL67 630 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 RGS9BPQ6ZS82 235 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 TTC7BQ86TV6 843 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 SUGP1Q8IWZ8 645 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 NTAN1Q96AB6 310 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 ATXN3LQ9H3M9 355 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 PDE4DIPQ5VU43 2346 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 A0A1W2PQH9 124 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 C9IYK1 514 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 TPP1O14773 563 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 GARSP41250 739 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 TAF1BQ53T94 588 aaPredicted RBP23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 SWT1Q5T5J6 900 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 PM20D1Q6GTS8 502 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 NLRP9Q7RTR0 991 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 PSTKQ8IV42 348 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 CNTD1Q8N815 330 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 ATAD1Q8NBU5 361 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 ACVR1CQ8NER5 493 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 LRRC37BQ96QE4 947 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 SSU72Q9NP77 194 aaKnown RBP23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 NEU3Q9UQ49 428 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 PLLPQ9Y342 182 aa23.68■■□□□ 1.38
CLPTM1-201ENST00000337392 TRDMT1O14717 391 aaKnown RBP23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 PAGE1O75459 146 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 SCAPQ12770 1279 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 ARL13BQ3SXY8 428 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 TRAF7Q6Q0C0 670 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 BZW1Q7L1Q6 419 aaKnown RBP23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 C14orf80Q86SX3 495 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 ZNF669Q96BR6 464 aaPredicted RBP23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 MOCOSQ96EN8 888 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 CHRAC1Q9NRG0 131 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 BAIAP2L1Q9UHR4 511 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 SUFUQ9UMX1 484 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 DLG2Q15700 870 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 CAB39LQ9H9S4 337 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 NLRC5Q86WI3 1866 aa23.67■■□□□ 1.38
CLPTM1-201ENST00000337392 CYP11A1P05108 521 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 PPIDQ08752 370 aaKnown RBP23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 RPAINQ86UA6 219 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 PARP9Q8IXQ6 854 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 ALKBH8Q96BT7 664 aaKnown RBP23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 LRRC39Q96DD0 335 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 TBC1D31Q96DN5 1066 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 SUSD3Q96L08 255 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 SLC9A7Q96T83 725 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 FRMD8Q9BZ67 464 aaPredicted RBP23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 VPS11Q9H270 941 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 SLC27A5Q9Y2P5 690 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 USH1CQ9Y6N9 552 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 RAB27AP51159 221 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 TSPY1Q01534 308 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 CHI3L2Q15782 390 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 BTBD8Q5XKL5 378 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 PACS1Q6VY07 963 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 RASSF3Q86WH2 238 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 SMC1BQ8NDV3 1235 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 EPAS1Q99814 870 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 KCNK13Q9HB14 408 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 TBC1D13Q9NVG8 400 aa23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 RANBP2P49792 3224 aaKnown RBP23.66■■□□□ 1.38
CLPTM1-201ENST00000337392 TTC24A2A3L6 582 aaPredicted RBP23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 T-ENOLP0DO92 83 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 KCNA4P22459 653 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 MNAT1P51948 309 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 SARNPP82979 210 aaKnown RBP23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 NIPAL4Q0D2K0 466 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 BST1Q10588 318 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 ATG14Q6ZNE5 492 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 GRAMD1AQ96CP6 724 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 TNFRSF10BO14763 440 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 KRT38O76015 456 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 ALADP13716 330 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 HSP90AA5PQ58FG0 334 aa23.65■■□□□ 1.38
CLPTM1-201ENST00000337392 TFAP2DQ7Z6R9 452 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms