RNA–Protein interactions for RNA: ENST00000334634.8

TRIM46-201, Transcript of tripartite motif containing 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM46, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-201ENST00000334634 CSH1P0DML2 217 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 CSH2P0DML3 217 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 DESP17661 470 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 DNAJB2P25686 324 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 NKX3-2P78367 333 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 DPYSQ14117 519 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 TRIM60Q495X7 471 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 FAM26DQ5JW98 314 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 CAPRIN2Q6IMN6 1127 aaKnown RBP13.11□□□□□ -0.31
TRIM46-201ENST00000334634 SPATA31D4Q6ZUB0 917 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 VSIG1Q86XK7 387 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 VPS52Q8N1B4 723 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 CKAP2Q8WWK9 683 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 TMEM109Q9BVC6 243 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 ACSS2Q9NR19 701 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 PAK5Q9P286 719 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 KLHL14Q9P2G3 628 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 KLHL8Q9P2G9 620 aaPredicted RBP13.11□□□□□ -0.31
TRIM46-201ENST00000334634 VANGL2Q9ULK5 521 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 C15orf41Q9Y2V0 281 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 USP34Q70CQ2 3546 aa13.11□□□□□ -0.31
TRIM46-201ENST00000334634 CCDC195A0A1B0GUA6 201 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 BCLAF3A2AJT9 711 aaKnown RBP13.1□□□□□ -0.31
TRIM46-201ENST00000334634 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ATP9BO43861 1147 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 PAGE1O75459 146 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 DGKIO75912 1065 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ITGB8P26012 769 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 TLE2Q04725 743 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 MROH9Q5TGP6 573 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 UNC5AQ6ZN44 842 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 CDHR3Q6ZTQ4 885 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 CCHCR1Q8TD31 782 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 KLHL29Q96CT2 875 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ZNF778Q96MU6 729 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ZNF570Q96NI8 536 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 CASD1Q96PB1 797 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 OLFM3Q96PB7 478 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 SLC13A1Q9BZW2 595 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 KDM4CQ9H3R0 1056 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 CSNK1G1Q9HCP0 422 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 NPHS2Q9NP85 383 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 SH3BP1Q9Y3L3 701 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 DOCK6Q96HP0 2047 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 VNN2O95498 520 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ERFP50548 548 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 PSMD5Q16401 504 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 PIGWQ7Z7B1 504 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ATP11CQ8NB49 1132 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
TRIM46-201ENST00000334634 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ZNF483Q8TF39 744 aaPredicted RBP13.1□□□□□ -0.31
TRIM46-201ENST00000334634 FCRL2Q96LA5 508 aaPredicted RBP13.1□□□□□ -0.31
TRIM46-201ENST00000334634 QKIQ96PU8 341 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRIM46-201ENST00000334634 TMEM237Q96Q45 408 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 GORASP1Q9BQQ3 440 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 KLC2Q9H0B6 622 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ZNF395Q9H8N7 513 aaPredicted RBP13.1□□□□□ -0.31
TRIM46-201ENST00000334634 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 LRFN2Q9ULH4 789 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ZMYND8Q9ULU4 1186 aaPredicted RBP13.1□□□□□ -0.31
TRIM46-201ENST00000334634 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 PSAT1Q9Y617 370 aa13.1□□□□□ -0.31
TRIM46-201ENST00000334634 H3BRJ5 948 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 CNTN5O94779 1100 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 RASIP1Q5U651 963 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 BNIPLQ7Z465 357 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 DCAKDQ8WVC6 231 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 BHMTQ93088 406 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 ADAM28Q9UKQ2 775 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 DNAJC8O75937 253 aaPredicted RBP13.09□□□□□ -0.31
TRIM46-201ENST00000334634 PDHA1P08559 390 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 ACRP10323 421 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 TAC1P20366 129 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 CD68P34810 354 aaPredicted RBP13.09□□□□□ -0.31
TRIM46-201ENST00000334634 MAXP61244 160 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 LACTB2Q53H82 288 aaPredicted RBP13.09□□□□□ -0.31
TRIM46-201ENST00000334634 CERCAMQ5T4B2 595 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 FITM2Q8N6M3 262 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 SIGLEC10Q96LC7 697 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 MECRQ9BV79 373 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 SYBUQ9NX95 663 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 PSMC3IPQ9P2W1 217 aaPredicted RBP13.09□□□□□ -0.31
TRIM46-201ENST00000334634 PHTF1Q9UMS5 762 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 A0A0G2JND7 137 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 CYP11A1P05108 521 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 KRT16P08779 473 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 ERVK-10P10266 1014 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 PYGBP11216 843 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 PTPN3P26045 913 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
TRIM46-201ENST00000334634 CDKL3Q8IVW4 592 aaPredicted RBP13.09□□□□□ -0.31
TRIM46-201ENST00000334634 CFAP52Q8N1V2 620 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 URGCPQ8TCY9 931 aa13.09□□□□□ -0.31
TRIM46-201ENST00000334634 ERP27Q96DN0 273 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms