RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 FAM47CQ5HY64 1035 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 WDR49Q8IV35 697 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 DSELQ8IZU8 1212 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 TDRD5Q8NAT2 981 aaKnown RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 CDKL2Q92772 493 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 LGMNQ99538 433 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 SNRNP25Q9BV90 132 aaKnown RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 ELOVL4Q9GZR5 314 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 TCF7L2Q9NQB0 619 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 C20orf96Q9NUD7 363 aaPredicted RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 NDUFA13Q9P0J0 144 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 COPG2Q9UBF2 871 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 PCDHA11Q9Y5I1 949 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 LOXHD1Q8IVV2 1947 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 SEC24DO94855 1032 aaPredicted RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 STAMBPO95630 424 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 ITGB3P05106 788 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 P4HA1P13674 534 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 PIK3R1P27986 724 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 L1CAMP32004 1257 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 NAMPTP43490 491 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 SERPINB9P50453 376 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 PTPN11Q06124 597 aaPredicted RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 FSTL1Q12841 308 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 DCTN2Q13561 401 aaKnown RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 STILQ15468 1287 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 VPS72Q15906 364 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 IL31Q6EBC2 164 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 BNC2Q6ZN30 1099 aaPredicted RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 ZNF534Q76KX8 674 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 PCDH20Q8N6Y1 951 aaKnown RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 UBR7Q8N806 425 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 CCNYQ8ND76 341 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 ANKRD36BP1Q96IX9 119 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 BTBD9Q96Q07 612 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 NPAS2Q99743 824 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 B3GNT5Q9BYG0 378 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 TRPV6Q9H1D0 765 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 RNF19AQ9NV58 838 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 ARHGAP10A1A4S6 786 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 LTFP02788 710 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 CYP2F1P24903 491 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 SH3BGRP55822 239 aaPredicted RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 HEATR6Q6AI08 1181 aaKnown RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 LAYNQ6UX15 382 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 CYP2R1Q6VVX0 501 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 MYO1HQ8N1T3 1032 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 VPS37AQ8NEZ2 397 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 UCN2Q96RP3 112 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 CNPY3Q9BT09 278 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 MRPS26Q9BYN8 205 aaKnown RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 SENP6Q9GZR1 1112 aaPredicted RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 PCDH18Q9HCL0 1135 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 SORCS3Q9UPU3 1222 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 STRNO43815 780 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 FBXO21O94952 628 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 IL4RP24394 825 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 SERPINB8P50452 374 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 ZNF143P52747 638 aaPredicted RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 C16orf72Q14CZ0 275 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 ITPRIPL1Q6GPH6 555 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 KRT80Q6KB66 452 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 ABHD15Q6UXT9 468 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 LPCAT2Q7L5N7 544 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 MARVELD2Q8N4S9 558 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 KYQ8NBH2 561 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 PLPP7Q8NBV4 271 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 GAB3Q8WWW8 586 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 ATP6V1E2Q96A05 226 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 PPWD1Q96BP3 646 aaKnown RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 PLEKHG4BQ96PX9 1271 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 APOL2Q9BQE5 337 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 SLC4A5Q9BY07 1137 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 DMTF1Q9Y222 760 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 KLRG2A4D1S0 409 aaPredicted RBP8.06□□□□□ -1.12
VMA21-201ENST00000330374 LZTS3O60299 673 aaPredicted RBP8.06□□□□□ -1.12
VMA21-201ENST00000330374 SUPT20HL2P0C7V6 817 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 ARSAP15289 507 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 PSMC3P17980 439 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 MX2P20592 715 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 FUT4P22083 530 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 AVPR1AP37288 418 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 ETFBP38117 255 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 PSMD7P51665 324 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 ADGRE1Q14246 886 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 TAZQ16635 292 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SUPT20HL1Q3ZLR7 823 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 NCAPG2Q86XI2 1143 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 CPNE9Q8IYJ1 553 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SLC4A11Q8NBS3 891 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SCYL1Q96KG9 808 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SERPINI1Q99574 410 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SIKE1Q9BRV8 207 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 PCDHAC1Q9H158 963 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 STYXL1Q9Y6J8 313 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 PRKCBP05771 671 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 NFICP08651 508 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 CCR3P51677 355 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms