RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 UNC5AQ6ZN44 842 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 C14orf80Q86SX3 495 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 ARHGAP12Q8IWW6 846 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 MPP5Q8N3R9 675 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 LZTR1Q8N653 840 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 ANKRD42Q8N9B4 389 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 MGARPQ8TDB4 240 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 GIPC2Q8TF65 315 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 VAT1Q99536 393 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 PRMT1Q99873 361 aaKnown RBP15.32■□□□□ 0.04
TPM3-205ENST00000328159 CCDC134Q9H6E4 229 aa15.32■□□□□ 0.04
TPM3-205ENST00000328159 ABHD14A-ACY1A0A1B0GW23 586 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 DFFAO00273 331 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 ZBTB24O43167 697 aaPredicted RBP15.31■□□□□ 0.04
TPM3-205ENST00000328159 APOEP02649 317 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 C1QAP02745 245 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 RPL17P18621 184 aaKnown RBP15.31■□□□□ 0.04
TPM3-205ENST00000328159 ATF6P18850 670 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 OR1D2P34982 312 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 KBTBD12Q3ZCT8 623 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 TEX44Q53QW1 395 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 C10orf120Q5SQS8 335 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 SPOUT1Q5T280 376 aaKnown RBP15.31■□□□□ 0.04
TPM3-205ENST00000328159 ITPRIPL1Q6GPH6 555 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 PRPF39Q86UA1 669 aaKnown RBP15.31■□□□□ 0.04
TPM3-205ENST00000328159 ATP6V0D2Q8N8Y2 350 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 ANKLE1Q8NAG6 615 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 SLC44A1Q8WWI5 657 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 DPF3Q92784 378 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 TOP1MTQ969P6 601 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 TSGA13Q96PP4 275 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 GBA3Q9H227 469 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 C11orf49Q9H6J7 331 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 NKIRAS1Q9NYS0 192 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 RSPH14Q9UHP6 348 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 TBX18O95935 607 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 ZDHHC11BP0C7U3 371 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 CCNCP24863 283 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 CD68P34810 354 aaPredicted RBP15.31■□□□□ 0.04
TPM3-205ENST00000328159 IFNAR2P48551 515 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 LRRC14Q15048 493 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 LRRC26Q2I0M4 334 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 KIAA1841Q6NSI8 718 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 FBXO46Q6PJ61 603 aaPredicted RBP15.31■□□□□ 0.04
TPM3-205ENST00000328159 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 RTL3Q8N8U3 475 aaKnown RBP15.31■□□□□ 0.04
TPM3-205ENST00000328159 MZB1Q8WU39 189 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
TPM3-205ENST00000328159 STAMBPL1Q96FJ0 436 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 CHMP6Q96FZ7 201 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 ZNF558Q96NG5 402 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 SMC6Q96SB8 1091 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 GORASP1Q9BQQ3 440 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 TTLL2Q9BWV7 592 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 FAM107BQ9H098 131 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 MARCH2Q9P0N8 246 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 PCDHA11Q9Y5I1 949 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
TPM3-205ENST00000328159 DOCK4Q8N1I0 1966 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 A0A1W2PPM1 405 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 FAM47DPA6NHR8 397 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 SDR42E2A6NKP2 422 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 WASH4PA8MWX3 477 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 PRPF4O43172 522 aaKnown RBP eCLIP15.3■□□□□ 0.04
TPM3-205ENST00000328159 SPAG7O75391 227 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 NFKB1P19838 968 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 PRKCHP24723 683 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 GJA8P48165 433 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 TUFMP49411 452 aaKnown RBP15.3■□□□□ 0.04
TPM3-205ENST00000328159 SESN2P58004 480 aaPredicted RBP15.3■□□□□ 0.04
TPM3-205ENST00000328159 SPARCL1Q14515 664 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 FAM117BQ6P1L5 589 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 ARHGAP36Q6ZRI8 547 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 MIB1Q86YT6 1006 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 GSDMBQ8TAX9 411 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 ZSCAN18Q8TBC5 510 aaPredicted RBP15.3■□□□□ 0.04
TPM3-205ENST00000328159 DYDC1Q8WWB3 177 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 ARMC5Q96C12 935 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 PAWRQ96IZ0 340 aaKnown RBP15.3■□□□□ 0.04
TPM3-205ENST00000328159 TEKT5Q96M29 485 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 CEP295NLQ96MC4 621 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 AGAP3Q96P47 875 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 ZNF317Q96PQ6 595 aaPredicted RBP15.3■□□□□ 0.04
TPM3-205ENST00000328159 UBE2OQ9C0C9 1292 aaKnown RBP15.3■□□□□ 0.04
TPM3-205ENST00000328159 SLC39A8Q9C0K1 460 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 KIF9Q9HAQ2 790 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 MPP6Q9NZW5 540 aa15.3■□□□□ 0.04
TPM3-205ENST00000328159 MAGED2Q9UNF1 606 aaPredicted RBP15.3■□□□□ 0.04
TPM3-205ENST00000328159 SMG5Q9UPR3 1016 aaKnown RBP15.3■□□□□ 0.04
TPM3-205ENST00000328159 NYNRINQ9P2P1 1898 aaKnown RBP15.29■□□□□ 0.04
TPM3-205ENST00000328159 IQANK1A0A1B0GTG1 560 aa15.29■□□□□ 0.04
TPM3-205ENST00000328159 SLC12A8A0AV02 714 aa15.29■□□□□ 0.04
TPM3-205ENST00000328159 ERI2A8K979 691 aaKnown RBP15.29■□□□□ 0.04
TPM3-205ENST00000328159 C2CD2LO14523 706 aa15.29■□□□□ 0.04
TPM3-205ENST00000328159 SUN1O94901 812 aa15.29■□□□□ 0.04
TPM3-205ENST00000328159 AP2A1O95782 977 aa15.29■□□□□ 0.04
TPM3-205ENST00000328159 JCHAINP01591 159 aa15.29■□□□□ 0.04
TPM3-205ENST00000328159 IGLV3-27P01718 113 aa15.29■□□□□ 0.04
TPM3-205ENST00000328159 SOD2P04179 222 aa15.29■□□□□ 0.04
TPM3-205ENST00000328159 INHBAP08476 426 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms