RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 HCFC1R1Q9NWW0 138 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 RPL26L1Q9UNX3 145 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 DRG1Q9Y295 367 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 REXO2Q9Y3B8 237 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SAR1BQ9Y6B6 198 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 C2orf78A6NCI8 922 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 C1QTNF3-AMACRE9PGA6 284 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 DCXO43602 365 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF500O60304 480 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 TBL1XO60907 577 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 PAPSS2O95340 614 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 IGSF6O95976 241 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 RARAP10276 462 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 IRF1P10914 325 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 HNRNPLP14866 589 aaKnown RBP eCLIP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 FCARP24071 287 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 EPHB2P29323 1055 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CHRNA3P32297 505 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 FDFT1P37268 417 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 NRLP54845 237 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 AP1S1P61966 158 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SIGLEC14Q08ET2 396 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SLC5A9Q2M3M2 681 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 GLE1Q53GS7 698 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SLC9A4Q6AI14 798 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 VITQ6UXI7 678 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 HFE2Q6ZVN8 426 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 BMP8AQ7Z5Y6 402 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 FAM131BQ86XD5 332 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 TSC1Q92574 1164 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 P3H4Q92791 437 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 TTC17Q96AE7 1141 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 HDAC11Q96DB2 347 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 TCEAL4Q96EI5 215 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 OSBPL8Q9BZF1 889 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 TMEM30AQ9NV96 361 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SNX12Q9UMY4 172 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 HS3ST4Q9Y661 456 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 NUMBLQ9Y6R0 609 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 EDDM13A0A1B0GTR0 161 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 FAM187AA6NFU0 413 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CHURC1-FNTBB4DL54 471 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SLC7A4O43246 635 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CYP17A1P05093 508 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 STARD6P59095 220 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 RPL7AP62424 266 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CDK16Q00536 496 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CAV1Q03135 178 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 DPYSQ14117 519 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 DHX34Q14147 1143 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CCDC85BQ15834 202 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CCNG2Q16589 344 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 ANKRD20A8PQ5CZ79 823 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SYPL2Q5VXT5 272 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 RWDD4Q6NW29 188 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 RASGEF1CQ8N431 466 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 C12orf50Q8NA57 414 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 ING5Q8WYH8 240 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 FAM161BQ96MY7 647 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 POLMQ9NP87 494 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 ACP6Q9NPH0 428 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 LZTFL1Q9NQ48 299 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 ARHGEF3Q9NR81 526 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SFMBT1Q9UHJ3 866 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 DNAI1Q9UI46 699 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 STARD13Q9Y3M8 1113 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 ARIH1Q9Y4X5 557 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF638Q14966 1978 aaKnown RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CCDC163A0A0D9SF12 145 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 H3BQ06 376 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 RIOK3O14730 519 aaKnown RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 KDELR3O43731 214 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 OPHN1O60890 802 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 GRAP2O75791 330 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 GABBR2O75899 941 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 MOCS2O96007 188 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PYGLP06737 847 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CFHP08603 1231 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 OXTRP30559 389 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ARSEP51690 589 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CLCN5P51795 746 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 SNRPD1P62314 119 aaKnown RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 NTHL1P78549 312 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 GNA12Q03113 381 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 GALNT2Q10471 571 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 RAP1GAP2Q684P5 730 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 Q7L0L9 218 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 EMC1Q8N766 993 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CLEC4CQ8WTT0 213 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 HSPH1Q92598 858 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CSPG4P5Q96PW8 444 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 DESI2Q9BSY9 194 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CALN1Q9BXU9 219 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 MUC3BQ9H195 1237 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 KCNK12Q9HB15 430 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ARHGEF4Q9NR80 690 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 VPS45Q9NRW7 570 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms