RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SAE1Q9UBE0 346 aaPredicted RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 A0A0B4J269 797 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 TMEM114B3SHH9 223 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 ALDH2P05091 517 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 UBA1P22314 1058 aaKnown RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 MSL3Q8N5Y2 521 aaKnown RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 EPS8L2Q9H6S3 715 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 MT-CO1P00395 513 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 PSMB4P28070 264 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 GPC1P35052 558 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 LPCAT2Q7L5N7 544 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 TMC7Q7Z402 723 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 SEPHS2Q99611 448 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 A1CFQ9NQ94 594 aaKnown RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 BANF1O75531 89 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 HOXC6P09630 235 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 TKTP29401 623 aaKnown RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 PBX1P40424 430 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 IL5RAQ01344 420 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 SLC39A12Q504Y0 691 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 FOXR2Q6PJQ5 311 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 CATSPERGQ6ZRH7 1159 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 LUZP2Q86TE4 346 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 B3GALNT2Q8NCR0 500 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 TMEM245Q9H330 911 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 NRDE2Q9H7Z3 1164 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 LRCH1Q9Y2L9 728 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 TSC22D4Q9Y3Q8 395 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 FMO4P31512 558 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 SLC16A1P53985 500 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 FKBP1CQ5VVH2 108 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 LGI2Q8N0V4 545 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 EID3Q8N140 333 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 BTN2A2Q8WVV5 523 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 MED8Q96G25 268 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 ACO2Q99798 780 aaKnown RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 TAS2R13Q9NYV9 303 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 UMODL1Q5DID0 1318 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 ZMYM2Q9UBW7 1377 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 A0A0A0MRY4 1105 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 MAFO75444 373 aaPredicted RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 ME2P23368 584 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 C16orf46Q6P387 395 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 UNC93AQ86WB7 457 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 RMND5BQ96G75 393 aaPredicted RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 ACTR8Q9H981 624 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 CAPN10Q9HC96 672 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 GBA2Q9HCG7 927 aaPredicted RBP11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 KLHL20Q9Y2M5 609 aa11.12□□□□□ -0.63
SNRNP200-201ENST00000323853 RASSF9O75901 435 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 KRT75O95678 551 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 NFICP08651 508 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 YWHAQP27348 245 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 CEP78Q5JTW2 689 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 TRAF7Q6Q0C0 670 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 FAM228AQ86W67 206 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 C4orf32Q8N8J7 132 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 BHLHE22Q8NFJ8 381 aaPredicted RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 SYNDIG1Q9H7V2 258 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 ATP13A1Q9HD20 1204 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 ACP6Q9NPH0 428 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 KRT84Q9NSB2 600 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 GGA2Q9UJY4 613 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 PADI4Q9UM07 663 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 WTIPA6NIX2 430 aaPredicted RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 RBAK-RBAKDNI3L0D1 243 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 FGF10O15520 208 aaPredicted RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 KRT6AP02538 564 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 KRT6BP04259 564 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 NUDT17P0C025 328 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 KRT20P35900 424 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 MLH1P40692 756 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 KRT6CP48668 564 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 MARSP56192 900 aaKnown RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 ELAVL2Q12926 359 aaKnown RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 MSLNQ13421 630 aaPredicted RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 XRCC4Q13426 336 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 ACVR2BQ13705 512 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 PCID2Q5JVF3 399 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 HYIQ5T013 277 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 RIOX2Q8IUF8 465 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 SLC44A2Q8IWA5 706 aaPredicted RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 SERAC1Q96JX3 654 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 CDRT15Q96T59 188 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 BDH2Q9BUT1 245 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 MRIQ9BWK5 157 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 CATSPERZQ9NTU4 200 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 TNFSF13BQ9Y275 285 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 SPACA6W5XKT8 324 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 TBKBP1A7MCY6 615 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 CKMP06732 381 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 HNRNPH3P31942 346 aaKnown RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 FUKQ8N0W3 1084 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 TNFRSF25Q93038 417 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 NSMCE2Q96MF7 247 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 TMEM51Q9NW97 253 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms