RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 SEPT4O43236 478 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PFDN1O60925 122 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 MICAL2O94851 1124 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 ARIH2O95376 493 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 CRTAMO95727 393 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 JUNP05412 331 aaKnown RBP12.48□□□□□ -0.41
SEC24A-201ENST00000322887 CHRNGP07510 517 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 CXCL8P10145 99 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 HOXD8P13378 290 aaPredicted RBP12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PTPN1P18031 435 aaKnown RBP12.48□□□□□ -0.41
SEC24A-201ENST00000322887 L1CAMP32004 1257 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 NUDT2P50583 147 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 CACNB2Q08289 660 aaPredicted RBP12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PGM2L1Q6PCE3 622 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 KYAT3Q6YP21 454 aaKnown RBP12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PYROXD2Q8N2H3 581 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 TTC13Q8NBP0 860 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 ICA1LQ8NDH6 482 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 ERLEC1Q96DZ1 483 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 HSPBAP1Q96EW2 488 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PRICKLE1Q96MT3 831 aaPredicted RBP12.48□□□□□ -0.41
SEC24A-201ENST00000322887 GPAMQ9HCL2 828 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PTCH2Q9Y6C5 1203 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 ZNF195O14628 629 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 FAM189A1O60320 539 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 MSCO60682 206 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 CSPG5O95196 566 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PSAPP07602 524 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 SMPD1P17405 629 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 SAT1P21673 171 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PRKCHP24723 683 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 FDFT1P37268 417 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 ADCYAP1R1P41586 468 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 DPP6P42658 865 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 THOP1P52888 689 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 LBX1P52954 281 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 TNFAIP2Q03169 654 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 EEF1DP3Q658K8 133 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 FAM91A1Q658Y4 838 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 IL31Q6EBC2 164 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 ABHD15Q6UXT9 468 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 FAM183BPQ6ZVS7 135 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 CLEC4CQ8WTT0 213 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
SEC24A-201ENST00000322887 LENG1Q96BZ8 264 aaPredicted RBP12.48□□□□□ -0.41
SEC24A-201ENST00000322887 CXCL16Q9H2A7 254 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 COG4Q9H9E3 785 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
SEC24A-201ENST00000322887 CCNT2O60583 730 aaKnown RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 FKBP6O75344 327 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 CLPTM1O96005 669 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 LTFP02788 710 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 NFICP08651 508 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 EPHA3P29320 983 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 CRHR1P34998 444 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 BCAR1P56945 870 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 ARHGAP1Q07960 439 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 WASHC5Q12768 1159 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 ITGA7Q13683 1181 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 GRM2Q14416 872 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 TAZQ16635 292 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 FBXO46Q6PJ61 603 aaPredicted RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 WDR75Q8IWA0 830 aaKnown RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 SCUBE3Q8IX30 993 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 TRPV1Q8NER1 839 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 PPTC7Q8NI37 304 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 LGMNQ99538 433 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 MIS12Q9H081 205 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 XPNPEP3Q9NQH7 507 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 GMPR2Q9P2T1 348 aaKnown RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 IGKV6D-21A0A0A0MT36 114 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 KRT38O76015 456 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 ELNP15502 786 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 EIF4BP23588 611 aaKnown RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 SLC5A2P31639 672 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 PPP2R5DQ14738 602 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 LY6KQ17RY6 165 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 FBXW8Q8N3Y1 598 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 SLC4A11Q8NBS3 891 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 RNF157Q96PX1 679 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 DHX35Q9H5Z1 703 aaKnown RBP12.47□□□□□ -0.41
SEC24A-201ENST00000322887 AP4B1Q9Y6B7 739 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 STYXL1Q9Y6J8 313 aa12.47□□□□□ -0.41
SEC24A-201ENST00000322887 A0A0J9YVX5 310 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 CHADO15335 359 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 PLIN3O60664 434 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 TFPTP0C1Z6 253 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 CDK4P11802 303 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 COX4I1P13073 169 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 FUT4P22083 530 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 MGAT1P26572 445 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 CNGA3Q16281 694 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 SNX32Q86XE0 403 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 NME8Q8N427 588 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 SPATA6LQ8N4H0 392 aa12.46□□□□□ -0.41
SEC24A-201ENST00000322887 NDRG1Q92597 394 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms