RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ALDH1A3P47895 512 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 LMAN1P49257 510 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 TEX44Q53QW1 395 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 MS4A13Q5J8X5 152 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 ITPRIPL1Q6GPH6 555 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 C3orf62Q6ZUJ4 267 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 C16orf59Q7L2K0 433 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 NLRP14Q86W24 1093 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 ARHGAP12Q8IWW6 846 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 TP53INP2Q8IXH6 220 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 KLHDC8BQ8IXV7 354 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 CCDC33Q8N5R6 958 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 ACSS3Q9H6R3 686 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 MRPL17Q9NRX2 175 aaKnown RBP18.31■□□□□ 0.52
RAB39A-201ENST00000320578 DNMT3LQ9UJW3 386 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 SLC12A8A0AV02 714 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 ZNF840PA6NDX5 716 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 C2CD2LO14523 706 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 ATP5C1P36542 298 aaKnown RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 ELK3P41970 407 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 SLCO1A2P46721 670 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 NDST2P52849 883 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 FAXCQ5TGI0 409 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 LRRC8BQ6P9F7 803 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 ZNF534Q76KX8 674 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 PID1Q7Z2X4 250 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 TMCO2Q7Z6W1 182 aaPredicted RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 ANKMY2Q8IV38 441 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 UMODL1-AS1Q8N2C9 162 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 ZSCAN18Q8TBC5 510 aaPredicted RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 CLP1Q92989 425 aaKnown RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 AZIN2Q96A70 460 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 TMEM248Q9NWD8 314 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 RABGEF1Q9UJ41 708 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 YIPF1Q9Y548 306 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 TRDMT1O14717 391 aaKnown RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 CACNG3O60359 315 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 SUN1O94901 812 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 TBX18O95935 607 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 MOCS2O96007 188 aaPredicted RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 MDH1P40925 334 aaKnown RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 IFI35P80217 286 aaPredicted RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 VEPH1Q14D04 833 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 C5orf22Q49AR2 442 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 TIGD7Q6NT04 549 aaPredicted RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 CYS1Q717R9 158 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 OTOP2Q7RTS6 562 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 C14orf80Q86SX3 495 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 CCNJLQ8IV13 435 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 CENPTQ96BT3 561 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 TEKT5Q96M29 485 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 PPP1R2P1Q96PQ5 205 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 PRMT1Q99873 361 aaKnown RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 ZYG11BQ9C0D3 744 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 CYP4F11Q9HBI6 524 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 KLHL8Q9P2G9 620 aaPredicted RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 UXTQ9UBK9 157 aaPredicted RBP18.3■□□□□ 0.52
RAB39A-201ENST00000320578 PRKAG2Q9UGJ0 569 aa18.3■□□□□ 0.52
RAB39A-201ENST00000320578 ZNF638Q14966 1978 aaKnown RBP18.29■□□□□ 0.52
RAB39A-201ENST00000320578 SMIM23A6NLE4 172 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 PSMD3O43242 534 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 LINC00271P0C7V0 271 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 HSPA1AP0DMV8 641 aaKnown RBP18.29■□□□□ 0.52
RAB39A-201ENST00000320578 HSPA1BP0DMV9 641 aaKnown RBP18.29■□□□□ 0.52
RAB39A-201ENST00000320578 CTSAP10619 480 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 HPDP32754 393 aaPredicted RBP18.29■□□□□ 0.52
RAB39A-201ENST00000320578 FPGSQ05932 587 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 HECTD3Q5T447 861 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 FIBCD1Q8N539 461 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 MAML1Q92585 1016 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 SIGLEC10Q96LC7 697 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 DHRS4Q9BTZ2 278 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 GBA3Q9H227 469 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 CCSER2Q9H7U1 834 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 TRPM5Q9NZQ8 1165 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 SEPT10Q9P0V9 454 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 MAGED2Q9UNF1 606 aaPredicted RBP18.29■□□□□ 0.52
RAB39A-201ENST00000320578 INSL6Q9Y581 213 aa18.29■□□□□ 0.52
RAB39A-201ENST00000320578 KIAA0100Q14667 2235 aaKnown RBP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 KCNK1O00180 336 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 MATN3O15232 486 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 BANF1O75531 89 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 GCAP28676 217 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 ELF1P32519 619 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 IRAK1P51617 712 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 GEMIN4P57678 1058 aaKnown RBP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 PLD1Q13393 1074 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 EXOC3L1Q86VI1 746 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 MIB1Q86YT6 1006 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 IGDCC3Q8IVU1 814 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 ATPAF2Q8N5M1 289 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 ARHGEF2Q92974 986 aaKnown RBP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 ZNF512Q96ME7 567 aaPredicted RBP18.28■□□□□ 0.52
RAB39A-201ENST00000320578 CYTH2Q99418 400 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 ZBP1Q9H171 429 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 SENP1Q9P0U3 644 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 AP3B1O00203 1094 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 MAFKO60675 156 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 FGF18O76093 207 aa18.28■□□□□ 0.52
RAB39A-201ENST00000320578 PSMB4P28070 264 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms