RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ZNF423Q2M1K9 1284 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 Q3C1V9 767 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 SLFN12LQ6IEE8 588 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 CYP4V2Q6ZWL3 525 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 FASTKD5Q7L8L6 764 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 SMYD1Q8NB12 490 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 LRTOMTQ8WZ04 291 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 PPWD1Q96BP3 646 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 CDH19Q9H159 772 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 STN1Q9H668 368 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ARMC7Q9H6L4 198 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 DHX33Q9H6R0 707 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 SUDS3Q9H7L9 328 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 JPH1Q9HDC5 661 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 SEPT10Q9P0V9 454 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 MFHAS1Q9Y4C4 1052 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 LDHAP00338 332 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 JUNP05412 331 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 PSAPP07602 524 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 IL4RP24394 825 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ATXN1P54253 815 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 DUOXA2Q1HG44 320 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 LSM12Q3MHD2 195 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 FAM47CQ5HY64 1035 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 EPGNQ6UW88 154 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ADCY4Q8NFM4 1077 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 WNK4Q96J92 1243 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ACO2Q99798 780 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 FERMT1Q9BQL6 677 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 YIPF2Q9BWQ6 316 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 PAIP1Q9H074 479 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 RIPK3Q9Y572 518 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 USP12O75317 370 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ENTPD3O75355 529 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 MICAL2O94851 1124 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 NR3C2P08235 984 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ARSAP15289 507 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 MX2P20592 715 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 GPD1P21695 349 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 GLRBP48167 497 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 RALGDSQ12967 914 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 PIGGQ5H8A4 983 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 C16orf89Q6UX73 402 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ERI1Q8IV48 349 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 CDKL2Q92772 493 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 HEXIM2Q96MH2 286 aaKnown RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 GCOM2Q9BZD3 368 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-202ENST00000318266 PDLIM7Q9NR12 457 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 SNX15Q9NRS6 342 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 INIPQ9NRY2 104 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 DCDC2Q9UHG0 476 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 PCDHGC3Q9UN70 934 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 CDC14AQ9UNH5 594 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 CDY2AQ9Y6F7 541 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 CDY1Q9Y6F8 540 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-202ENST00000318266 GOLGA8TH3BQL2 631 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 ATG7O95352 703 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 COL6A2P12110 1019 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 MYL4P12829 197 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 CKMT2P17540 419 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 ME2P23368 584 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 ACAT1P24752 427 aaKnown RBP9.87□□□□□ -0.83
PTPRA-202ENST00000318266 CDH5P33151 784 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-202ENST00000318266 ABCD1P33897 745 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 RPL26P61254 145 aaKnown RBP9.87□□□□□ -0.83
PTPRA-202ENST00000318266 MGAT5BQ3V5L5 792 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 MTX3Q5HYI7 312 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 KCNT2Q6UVM3 1135 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 LAYNQ6UX15 382 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 TICAM1Q8IUC6 712 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPRA-202ENST00000318266 CATSPER1Q8NEC5 780 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 FNIP1Q8TF40 1166 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 SLC7A3Q8WY07 619 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 SLC29A1Q99808 456 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 HAUS8Q9BT25 410 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 PLK2Q9NYY3 685 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 MOCS1Q9NZB8 636 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 RGSL1A5PLK6 1076 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF23P17027 643 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 TFE3P19532 575 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-202ENST00000318266 HARS2P49590 506 aaKnown RBP9.87□□□□□ -0.83
PTPRA-202ENST00000318266 ATP1A4Q13733 1029 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 GRAMD4Q6IC98 578 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 XKR5Q6UX68 686 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 BRSK2Q8IWQ3 736 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 DCLK2Q8N568 766 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 FAM47BQ8NA70 645 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 SNRNP25Q9BV90 132 aaKnown RBP9.87□□□□□ -0.83
PTPRA-202ENST00000318266 PCDH18Q9HCL0 1135 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 FAM49BQ9NUQ9 324 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 SELENONQ9NZV5 590 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 PCDHB12Q9Y5F1 795 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 STYXL1Q9Y6J8 313 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 CROCCQ5TZA2 2017 aa9.87□□□□□ -0.83
PTPRA-202ENST00000318266 H0YCG3 227 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 FAM189A1O60320 539 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 H6PDO95479 791 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF26P17031 533 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms