RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CMC1Q7Z7K0 106 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 CLEC14AQ86T13 490 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 SATL1Q86VE3 508 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 PLD6Q8N2A8 252 aaKnown RBP19.56■□□□□ 0.72
RTN4-201ENST00000317610 MAPK15Q8TD08 544 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 P2RY11Q96G91 374 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 VPS28Q9UK41 221 aa19.56■□□□□ 0.72
RTN4-201ENST00000317610 SCN1AP35498 2009 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 A0A087WZ62 844 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 E9PBE3 544 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 KLHL41O60662 606 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 H2AFYO75367 372 aaKnown RBP19.55■□□□□ 0.72
RTN4-201ENST00000317610 HSPA4LO95757 839 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 CYP2C8P10632 490 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 ETS2P15036 469 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 PSMB4P28070 264 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 LIMK2P53671 638 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 TLR1Q15399 786 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 TREML2Q5T2D2 321 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 STRADAQ7RTN6 431 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 LINC01465Q8N7H1 131 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 SLC7A14Q8TBB6 771 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 DCUN1D1Q96GG9 259 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 LENG8Q96PV6 779 aaPredicted RBP19.55■□□□□ 0.72
RTN4-201ENST00000317610 FDXACB1Q9BRP7 624 aaPredicted RBP19.55■□□□□ 0.72
RTN4-201ENST00000317610 SPATC1LQ9H0A9 340 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 ZCWPW1Q9H0M4 648 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 IGSF9Q9P2J2 1179 aa19.55■□□□□ 0.72
RTN4-201ENST00000317610 CAPN8A6NHC0 703 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 ARL4AP40617 200 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 MLH1P40692 756 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 SPATA24Q86W54 205 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 PYROXD2Q8N2H3 581 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 DRAXINQ8NBI3 349 aaPredicted RBP19.54■□□□□ 0.72
RTN4-201ENST00000317610 OPTNQ96CV9 577 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 PRICKLE1Q96MT3 831 aaPredicted RBP19.54■□□□□ 0.72
RTN4-201ENST00000317610 FCRL3Q96P31 734 aaPredicted RBP19.54■□□□□ 0.72
RTN4-201ENST00000317610 MAN1C1Q9NR34 630 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 FZD10Q9ULW2 581 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 RPS6KL1Q9Y6S9 549 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 TXNDC9O14530 226 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 MPOP05164 745 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 THRAP10827 490 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 SPRP35270 261 aaPredicted RBP19.54■□□□□ 0.72
RTN4-201ENST00000317610 PSTKQ8IV42 348 aaKnown RBP19.54■□□□□ 0.72
RTN4-201ENST00000317610 TNS4Q8IZW8 715 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 STON2Q8WXE9 905 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 KIF12Q96FN5 646 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 GCNAQ96QF7 691 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 TCF7L2Q9NQB0 619 aa19.54■□□□□ 0.72
RTN4-201ENST00000317610 KPNA7A9QM74 516 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 SLC22A2O15244 555 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 PIK3R1P27986 724 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 C16orf89Q6UX73 402 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 APOBEC3FQ8IUX4 373 aaKnown RBP19.53■□□□□ 0.72
RTN4-201ENST00000317610 TDRD5Q8NAT2 981 aaKnown RBP19.53■□□□□ 0.72
RTN4-201ENST00000317610 RNF217Q8TC41 542 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 EZH1Q92800 747 aaPredicted RBP19.53■□□□□ 0.72
RTN4-201ENST00000317610 DGCR14Q96DF8 476 aaKnown RBP19.53■□□□□ 0.72
RTN4-201ENST00000317610 PGBD4Q96DM1 585 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 OR52B2Q96RD2 323 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 SERPINI1Q99574 410 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 UBE2OQ9C0C9 1292 aaKnown RBP19.53■□□□□ 0.72
RTN4-201ENST00000317610 RAB26Q9ULW5 256 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 TRIM13O60858 407 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 DNAJA2O60884 412 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 PABPC1LQ4VXU2 614 aaKnown RBP19.53■□□□□ 0.72
RTN4-201ENST00000317610 BSPRYQ5W0U4 402 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 CES3Q6UWW8 571 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 UNC93AQ86WB7 457 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 TICAM1Q8IUC6 712 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 ZNF567Q8N184 647 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 MPHOSPH6Q99547 160 aaKnown RBP19.53■□□□□ 0.72
RTN4-201ENST00000317610 Q9H521 79 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 PLK2Q9NYY3 685 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 SNX9Q9Y5X1 595 aa19.53■□□□□ 0.72
RTN4-201ENST00000317610 RGSL1A5PLK6 1076 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 PENKP01210 267 aaPredicted RBP19.52■□□□□ 0.72
RTN4-201ENST00000317610 RGS2P41220 211 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 RPL5P46777 297 aaKnown RBP19.52■□□□□ 0.72
RTN4-201ENST00000317610 BST2Q10589 180 aaKnown RBP19.52■□□□□ 0.72
RTN4-201ENST00000317610 PDK1Q15118 436 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 ZNF484Q5JVG2 852 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 FSTL4Q6MZW2 842 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 ZFP1Q6P2D0 407 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 SREK1Q8WXA9 508 aaKnown RBP19.52■□□□□ 0.72
RTN4-201ENST00000317610 FERMT1Q9BQL6 677 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 LRRC40Q9H9A6 602 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.52■□□□□ 0.72
RTN4-201ENST00000317610 RALGAPA2Q2PPJ7 1873 aa19.52■□□□□ 0.72
RTN4-201ENST00000317610 A0A096LPK6 155 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.52■□□□□ 0.71
RTN4-201ENST00000317610 E2F8A0AVK6 867 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.52■□□□□ 0.71
RTN4-201ENST00000317610 MATN2O00339 956 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 OR6B1O95007 311 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 HK2P52789 917 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 ADGRE1Q14246 886 aa19.52■□□□□ 0.71
RTN4-201ENST00000317610 R3HDM1Q15032 1099 aaKnown RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms