RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SCNN1DP51172 638 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PSMC5P62195 406 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ATP1A4Q13733 1029 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 CAMK1Q14012 370 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF699Q32M78 642 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PDZK1Q5T2W1 519 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF767PQ75MW2 155 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ATG9AQ7Z3C6 839 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 FEZF2Q8TBJ5 459 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 TRUB1Q8WWH5 349 aaKnown RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 TAMM41Q96BW9 452 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 LRRC40Q9H9A6 602 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 WDR41Q9HAD4 459 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 KLHL8Q9P2G9 620 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 FADS2P1A8MWK0 482 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 E9PBE3 544 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 APOL3O95236 402 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ERCC2P18074 760 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 NFKB1P19838 968 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 AKT1P31749 480 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 MAGEA10P43363 369 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 YWHAHQ04917 246 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PRKG1Q13976 671 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PLEKHG6Q3KR16 790 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 TLDC1Q6P9B6 456 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 INPP5FQ9Y2H2 1132 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 AAR2Q9Y312 384 aaKnown RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 GRIP1Q9Y3R0 1128 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 AIM2O14862 343 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 GNPATO15228 680 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 C8BP07358 591 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ENO3P13929 434 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 AOC1P19801 751 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 SLC1A6P48664 564 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ANTXR2P58335 489 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 LSAMPQ13449 338 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PCBP1Q15365 356 aaKnown RBP eCLIP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 EPHA7Q15375 998 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 GALNTL6Q49A17 601 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PADI6Q6TGC4 694 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 FITM2Q8N6M3 262 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 LRRC57Q8N9N7 239 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 IPCEF1Q8WWN9 437 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ASB9Q96DX5 294 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 RTFDC1Q9BY42 306 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 SP140LQ9H930 580 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 TOPORSQ9NS56 1045 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 TMEM216Q9P0N5 145 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 CDH9Q9ULB4 789 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 CREBBPQ92793 2442 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF804BA4D1E1 1349 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ILVBLA1L0T0 632 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 NR4A1P22736 598 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 CCND2P30279 289 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 QARSP47897 775 aaKnown RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PMS1P54277 932 aaKnown RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PRAMEP78395 509 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 FOXO4P98177 505 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 DMC1Q14565 340 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 MYBPC3Q14896 1274 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 SNRNP35Q16560 246 aaKnown RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF568Q3ZCX4 644 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 TMEM119Q4V9L6 283 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 USP17L2Q6R6M4 530 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 C1orf54Q8WWF1 131 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 RNF34Q969K3 372 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 CIDECQ96AQ7 238 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 CENPNQ96H22 339 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 ZFYVE19Q96K21 471 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 CNDP2Q96KP4 475 aaKnown RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 KCTD15Q96SI1 283 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 PRG3Q9Y2Y8 225 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-201ENST00000317147 FRYLO94915 3013 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 SIPA1L1O43166 1804 aa4.6□□□□□ -1.67
CNOT1-201ENST00000317147 A0A1W2PRG6 482 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 AQP12BA6NM10 295 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 GSG1L2A8MUP6 293 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 NBPF26B4DH59 902 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 SNPHO15079 494 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 HDAC3O15379 428 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 SYNCRIPO60506 623 aaKnown RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 SOAT2O75908 522 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 ITGA2P17301 1181 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 PPIBP23284 216 aaKnown RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 PTGS2P35354 604 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 AIF1P55008 147 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 PICALMQ13492 652 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 TMEM270Q6UE05 265 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 CCDC60Q8IWA6 550 aaPredicted RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 AQP12AQ8IXF9 295 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 TCAIMQ8N3R3 496 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 RNASE11Q8TAA1 199 aaKnown RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 TSPEARQ8WU66 669 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 SH3KBP1Q96B97 665 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 TMA16Q96EY4 203 aaKnown RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 AGBL1Q96MI9 1066 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 HNRNPABQ99729 332 aaKnown RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 MTMR12Q9C0I1 747 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 PCMTD2Q9NV79 361 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 VPS28Q9UK41 221 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms