RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 SULT1E1P49888 294 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 ATXN3P54252 364 aaPredicted RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 PITX1P78337 314 aaPredicted RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 NME3Q13232 169 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 DUOXA1Q1HG43 343 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 ZC3H12AQ5D1E8 599 aaKnown RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 ADGRF1Q5T601 910 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 EGFLAMQ63HQ2 1017 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 E4F1Q66K89 784 aaPredicted RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 SPECC1LQ69YQ0 1117 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 GRAMD4Q6IC98 578 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 PPP1R2P3Q6NXS1 205 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 PHF13Q86YI8 300 aaPredicted RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 SLC41A1Q8IVJ1 513 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 HDDC3Q8N4P3 179 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 MINDY1Q8N5J2 469 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 FCRL2Q96LA5 508 aaPredicted RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 DDX50Q9BQ39 737 aaKnown RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 SELENOOQ9BVL4 669 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 TRIM5Q9C035 493 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 CAPN10Q9HC96 672 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 DNAJC17Q9NVM6 304 aaKnown RBP12.55□□□□□ -0.4
ABCD3-201ENST00000315713 RRN3Q9NYV6 651 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 PLK2Q9NYY3 685 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 DEC1Q9P2X7 70 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 SLC12A6Q9UHW9 1150 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 MSRB2Q9Y3D2 182 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 IGSF10Q6WRI0 2623 aa12.55□□□□□ -0.4
ABCD3-201ENST00000315713 IGHV1OR15-9A0A0B4J2B8 117 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 TYW5A2RUC4 315 aaKnown RBP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 TMCO5BA8MYB1 307 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 UPK3BL1B0FP48 263 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 UPK3BL2E5RIL1 263 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 CACNG3O60359 315 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 OPHN1O60890 802 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 IGLV3-25P01717 112 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 SLC2A3P11169 496 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 NDUFV2P19404 249 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 ABCB4P21439 1286 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 CCR1P32246 355 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 ZNF33AQ06730 810 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 TRIM14Q14142 442 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 MPPE1Q53F39 396 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 ACAD10Q6JQN1 1059 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 NUDT18Q6ZVK8 323 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 SND1Q7KZF4 910 aaKnown RBP eCLIP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 ZNF571Q7Z3V5 609 aaPredicted RBP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 TRMT11Q7Z4G4 463 aaKnown RBP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 VSTM4Q8IW00 320 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 FAM217AQ8IXS0 508 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 ATP6V0D2Q8N8Y2 350 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 AZIN2Q96A70 460 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 SLC39A13Q96H72 371 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 HSPA12BQ96MM6 686 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 ACOX2Q99424 681 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 RBSNQ9H1K0 784 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 SLC6A17Q9H1V8 727 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 SLC6A14Q9UN76 642 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 LHX6Q9UPM6 363 aa12.54□□□□□ -0.4
ABCD3-201ENST00000315713 BZW2Q9Y6E2 419 aaKnown RBP12.54□□□□□ -0.4
ABCD3-201ENST00000315713 PLXNA2O75051 1894 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 A0A1W2PQF6 199 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 PENKP01210 267 aaPredicted RBP12.53□□□□□ -0.4
ABCD3-201ENST00000315713 SERPINF2P08697 491 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 NTSR1P30989 418 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 FLT3P36888 993 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 DGKGP49619 791 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 DEUP1Q05D60 604 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 FYB2Q5VWT5 728 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 DNAJC24Q6P3W2 148 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 RFWD3Q6PCD5 774 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 SLC36A4Q6YBV0 504 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 MON1BQ7L1V2 547 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 CHCHD4Q8N4Q1 142 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 EMC1Q8N766 993 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 CEP76Q8TAP6 659 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 TMA16Q96EY4 203 aaKnown RBP12.53□□□□□ -0.4
ABCD3-201ENST00000315713 BTN2A3PQ96KV6 586 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 CAMK1GQ96NX5 476 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 NPY6RQ99463 290 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 SYT11Q9BT88 431 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 ANP32EQ9BTT0 268 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 CD248Q9HCU0 757 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 TMEM59LQ9UK28 342 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 CYP8B1Q9UNU6 501 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 RAD54BQ9Y620 910 aa12.53□□□□□ -0.4
ABCD3-201ENST00000315713 SHROOM3Q8TF72 1996 aa12.52□□□□□ -0.4
ABCD3-201ENST00000315713 ANKRD62A6NC57 917 aa12.52□□□□□ -0.41
ABCD3-201ENST00000315713 GJB6O95452 261 aa12.52□□□□□ -0.41
ABCD3-201ENST00000315713 F9P00740 461 aa12.52□□□□□ -0.41
ABCD3-201ENST00000315713 SERPING1P05155 500 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms