RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LHX8Q68G74 356 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 CAPRIN2Q6IMN6 1127 aaKnown RBP12.74□□□□□ -0.37
RNF4-201ENST00000314289 RGS18Q9NS28 235 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 MPP6Q9NZW5 540 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 SENP1Q9P0U3 644 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 RCOR3Q9P2K3 495 aaPredicted RBP12.74□□□□□ -0.37
RNF4-201ENST00000314289 PSAT1Q9Y617 370 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 THSD7BQ9C0I4 1608 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 A0A1W2PQH9 124 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 ENO4A6NNW6 628 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 STK10O94804 968 aaKnown RBP12.74□□□□□ -0.37
RNF4-201ENST00000314289 TBX18O95935 607 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 JCHAINP01591 159 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 CYP11A1P05108 521 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 ALADP13716 330 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 MAGEA3P43357 314 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 CXCR3P49682 368 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 USP46P62068 366 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 PAFAH1B3Q15102 231 aaKnown RBP12.74□□□□□ -0.37
RNF4-201ENST00000314289 MTFR1Q15390 333 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 MCUQ8NE86 351 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 DBF4BQ8NFT6 615 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 ZNF75CPQ92670 426 aaPredicted RBP12.74□□□□□ -0.37
RNF4-201ENST00000314289 FAM193BQ96PV7 902 aaPredicted RBP12.74□□□□□ -0.37
RNF4-201ENST00000314289 PHACTR1Q9C0D0 580 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 BATF3Q9NR55 127 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 PCMTD2Q9NV79 361 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 DCTN4Q9UJW0 460 aa12.74□□□□□ -0.37
RNF4-201ENST00000314289 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 HMX2A2RU54 273 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 GOLGA8TH3BQL2 631 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 ATP9BO43861 1147 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 TADA2AO75478 443 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 ERVK-10P10266 1014 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 TPSB2P20231 275 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 MAGEA6P43360 314 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 NKX3-2P78367 333 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 TPSAB1Q15661 275 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 PDK4Q16654 411 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 PM20D1Q6GTS8 502 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 OTOP3Q7RTS5 596 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 SCD5Q86SK9 330 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 GBP7Q8N8V2 638 aaPredicted RBP12.73□□□□□ -0.37
RNF4-201ENST00000314289 DNAAF3Q8N9W5 541 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 GSDMBQ8TAX9 411 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 GORASP1Q9BQQ3 440 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 NPHS2Q9NP85 383 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 KLHL14Q9P2G3 628 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 HACD1B0YJ81 288 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 FAM163BP0C2L3 166 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 GLUD2P49448 558 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 TAF11Q15544 211 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 PSTKQ8IV42 348 aaKnown RBP12.73□□□□□ -0.37
RNF4-201ENST00000314289 ARNTL2Q8WYA1 636 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 OXNAD1Q96HP4 312 aaPredicted RBP12.73□□□□□ -0.37
RNF4-201ENST00000314289 EPAS1Q99814 870 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 YIPF3Q9GZM5 350 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 RXFP1Q9HBX9 757 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 OPHN1O60890 802 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 PAGE1O75459 146 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 NFKB1P19838 968 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 CD68P34810 354 aaPredicted RBP12.73□□□□□ -0.37
RNF4-201ENST00000314289 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
RNF4-201ENST00000314289 FAM171A1Q5VUB5 890 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 OTOAQ7RTW8 1153 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 COLGALT2Q8IYK4 626 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 NTAN1Q96AB6 310 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 SRPK1Q96SB4 655 aaKnown RBP12.73□□□□□ -0.37
RNF4-201ENST00000314289 SLC9A7Q96T83 725 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 GPR62Q9BZJ7 368 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 ZNF395Q9H8N7 513 aaPredicted RBP12.73□□□□□ -0.37
RNF4-201ENST00000314289 XAB2Q9HCS7 855 aaKnown RBP12.73□□□□□ -0.37
RNF4-201ENST00000314289 ARHGEF3Q9NR81 526 aa12.73□□□□□ -0.37
RNF4-201ENST00000314289 C2orf71A6NGG8 1288 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 NBNO60934 754 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 HMBSP08397 361 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 BGNP21810 368 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 FAM26DQ5JW98 314 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 CERCAMQ5T4B2 595 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 TTC39BQ5VTQ0 682 aaPredicted RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 SPATA22Q8NHS9 363 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 AZIN2Q96A70 460 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 ZNF419Q96HQ0 510 aaPredicted RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 SCLYQ96I15 445 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 TMEM237Q96Q45 408 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 DSEQ9UL01 958 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 SDR42E2A6NKP2 422 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 COPEO14579 308 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 TNFRSF10BO14763 440 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 ZWINTO95229 277 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 F9P00740 461 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 PRKCHP24723 683 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 FDFT1P37268 417 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 GARSP41250 739 aaKnown RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 PGGT1BP53609 377 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 SARNPP82979 210 aaKnown RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 SCAPQ12770 1279 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 TCTN1Q2MV58 587 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 PARP6Q2NL67 630 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms