RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 LIMD1Q9UGP4 676 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 SH3BP1Q9Y3L3 701 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 FAM237BA0A1B0GVD1 139 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CYP3A7P24462 503 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CDC25CP30307 473 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 VPS72Q15906 364 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 MARC1Q5VT66 337 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 TTC23Q5W5X9 447 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CYP2R1Q6VVX0 501 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 FGD2Q7Z6J4 655 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 FBXW8Q8N3Y1 598 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 RP9Q8TA86 221 aaKnown RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 ZSCAN18Q8TBC5 510 aaPredicted RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 STARD8Q92502 1023 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 PRRG1O14668 218 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 RAD51BO15315 384 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 SERPINF2P08697 491 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 ZNF618Q5T7W0 954 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 AMER2Q8N7J2 671 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 ENKURQ8TC29 256 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CLEC4MQ9H2X3 399 aaPredicted RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 DMTF1Q9Y222 760 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 SNRPB2P08579 225 aaKnown RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 ALOX15P16050 662 aaPredicted RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 CYP4Z2PQ8N1L4 340 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 ABI2Q9NYB9 513 aaPredicted RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 BTBD3Q9Y2F9 522 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 H3BNX3 289 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 KRT36O76013 467 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 PPP2R1BP30154 601 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 NDST1P52848 882 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 CDH18Q13634 790 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 TRABD2AQ86V40 505 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 HEATR4Q86WZ0 1026 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 TTC30BQ8N4P2 665 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 DNAJC19Q96DA6 116 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 NT5MQ9NPB1 228 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 ENTPD7Q9NQZ7 604 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 GPATCH2LQ9NWQ4 482 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 ATXN10Q9UBB4 475 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 TMCO1Q9UM00 188 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 SQORQ9Y6N5 450 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 RIMS1Q86UR5 1692 aaKnown RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 A0A0A0MRY4 1105 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 PIGNO95427 931 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 BNIPLQ7Z465 357 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 RNF148Q8N7C7 305 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 SPATA13Q96N96 652 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 PIF1Q9H611 641 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 KCNMB3Q9NPA1 279 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 MEGF6O75095 1541 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 HS6ST1O60243 411 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 HOXB6P17509 224 aaKnown RBP13.41□□□□□ -0.26
SNED1-201ENST00000310397 GLRA2P23416 452 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 SQLEQ14534 574 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 ZNF470Q6ECI4 717 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 BRSK2Q8IWQ3 736 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 ACTR8Q9H981 624 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 NMRK2Q9NPI5 230 aa13.41□□□□□ -0.26
SNED1-201ENST00000310397 IL1R1P14778 569 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 JAK1P23458 1154 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 BACE1P56817 501 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 YWHAZP63104 245 aaKnown RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 TTC7BQ86TV6 843 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 SLC16A1P53985 500 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 TNK2Q07912 1038 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 ITGADQ13349 1161 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 ACVR2BQ13705 512 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 MAPK11Q15759 364 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 ARMC3Q5W041 872 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 ANKS6Q68DC2 871 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 SPRTNQ9H040 489 aaPredicted RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 CLK4Q9HAZ1 481 aaKnown RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 EDF1O60869 148 aaKnown RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 COX4I1P13073 169 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 TMEM63BQ5T3F8 832 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 RDH11Q8TC12 318 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 KLHL20Q9Y2M5 609 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 GNG14A0A1W2PPG7 69 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 TCF3P15923 654 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 MYL12AP19105 171 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 ITGALP20701 1170 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 ALDH6A1Q02252 535 aaKnown RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 PIWIL4Q7Z3Z4 852 aaKnown RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 ZSWIM2Q8NEG5 633 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 SYTL5Q8TDW5 730 aaPredicted RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 ZFP42Q96MM3 310 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 OPLAHO14841 1288 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 NBNO60934 754 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 BST1Q10588 318 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 PTAR1Q7Z6K3 402 aaPredicted RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 UTP15Q8TED0 518 aaKnown RBP13.4□□□□□ -0.26
SNED1-201ENST00000310397 UBP1Q9NZI7 540 aa13.4□□□□□ -0.26
SNED1-201ENST00000310397 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNED1-201ENST00000310397 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms