RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 GPD2P43304 727 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 CCR3P51677 355 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 SNAPC2Q13487 334 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 CCL14Q16627 93 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 C6orf52Q5T4I8 152 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 TRNP1Q6NT89 227 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 CLVS1Q8IUQ0 354 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-201ENST00000309428 APPL2Q8NEU8 664 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 GAD1Q99259 594 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 DDIT4Q9NX09 232 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 LGALS13Q9UHV8 139 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 LNPEPQ9UIQ6 1025 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 CILPO75339 1184 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 PSMC3P17980 439 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 ALDH1A3P47895 512 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 CHN2P52757 468 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 SOWAHAQ2M3V2 549 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 CDHR3Q6ZTQ4 885 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 AMIGO2Q86SJ2 522 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 PCDH19Q8TAB3 1148 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 EFHD1Q9BUP0 239 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 PAK5Q9P286 719 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 NUP205Q92621 2012 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 ARHGEF37A1IGU5 675 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 BUD23O43709 281 aaKnown RBP12.96□□□□□ -0.33
RETREG3-201ENST00000309428 C22orf31O95567 290 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 TGFB3P10600 412 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 ALADP13716 330 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 TARBP2Q15633 366 aaKnown RBP12.96□□□□□ -0.33
RETREG3-201ENST00000309428 ITPRIPL1Q6GPH6 555 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 SPATA16Q9BXB7 569 aa12.96□□□□□ -0.33
RETREG3-201ENST00000309428 UPF3AQ9H1J1 476 aaKnown RBP12.96□□□□□ -0.33
RETREG3-201ENST00000309428 ASB14A6NK59 587 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 APOC4-APOC2K7ER74 178 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 AGRPO00253 132 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 PRPF4O43172 522 aaKnown RBP eCLIP12.96□□□□□ -0.34
RETREG3-201ENST00000309428 TSPAN3O60637 253 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 RNASEH1O60930 286 aaKnown RBP12.96□□□□□ -0.34
RETREG3-201ENST00000309428 APOC2P02655 101 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 GNAZP19086 355 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 PSMB4P28070 264 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 EPHA3P29320 983 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 GNASQ5JWF2 1037 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 CXCL17Q6UXB2 119 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 BBS12Q6ZW61 710 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 PIGZQ86VD9 579 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 MYLK4Q86YV6 388 aaPredicted RBP12.96□□□□□ -0.34
RETREG3-201ENST00000309428 PHC3Q8NDX5 983 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 TMEM79Q9BSE2 394 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 MMADHCQ9H3L0 296 aaPredicted RBP12.96□□□□□ -0.34
RETREG3-201ENST00000309428 SSX2IPQ9Y2D8 614 aa12.96□□□□□ -0.34
RETREG3-201ENST00000309428 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 B3GAT3O94766 335 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 TMCC1O94876 653 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 LSM8O95777 96 aaKnown RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 CDK7P50613 346 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 SLC25A11Q02978 314 aaKnown RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 MOGSQ13724 837 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 HFE2Q6ZVN8 426 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 C12orf50Q8NA57 414 aaPredicted RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 PIWIL2Q8TC59 973 aaKnown RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 NAT14Q8WUY8 206 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 VCPIP1Q96JH7 1222 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 RNF157Q96PX1 679 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 PANX3Q96QZ0 392 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 TSPAN1O60635 241 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 PMPCBO75439 489 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 SMPD1P17405 629 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 DLG2Q15700 870 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 KBTBD2Q8IY47 623 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 COLGALT1Q8NBJ5 622 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 ING2Q9H160 280 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 ADNPQ9H2P0 1102 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 PCDH18Q9HCL0 1135 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 KCNK4Q9NYG8 393 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 TNFSF13BQ9Y275 285 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 PRG3Q9Y2Y8 225 aaPredicted RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 KLHL33A6NCF5 533 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 ZBTB42B2RXF5 422 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 BTBD19C9JJ37 291 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 ZNF189O75820 626 aaPredicted RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 TM7SF2O76062 418 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 ABHD2P08910 425 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 PLK1P53350 603 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 LAMC2Q13753 1193 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 USP10Q14694 798 aaKnown RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 BHLHE22Q8NFJ8 381 aaPredicted RBP12.95□□□□□ -0.34
RETREG3-201ENST00000309428 B3GALT6Q96L58 329 aa12.95□□□□□ -0.34
RETREG3-201ENST00000309428 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
RETREG3-201ENST00000309428 THSD7AQ9UPZ6 1657 aa12.94□□□□□ -0.34
RETREG3-201ENST00000309428 CCL22O00626 93 aa12.94□□□□□ -0.34
RETREG3-201ENST00000309428 SLC25A27O95847 323 aa12.94□□□□□ -0.34
RETREG3-201ENST00000309428 CPA3P15088 417 aa12.94□□□□□ -0.34
RETREG3-201ENST00000309428 STX1BP61266 288 aa12.94□□□□□ -0.34
RETREG3-201ENST00000309428 SFT2D3Q587I9 215 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms