RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TREML1Q86YW5 311 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 RBM15BQ8NDT2 890 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 PIP4K2CQ8TBX8 421 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 DIS3LQ8TF46 1054 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 HASPINQ8TF76 798 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 SNRNP27Q8WVK2 155 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 PANX3Q96QZ0 392 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CFHR5Q9BXR6 569 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 UNC93B1Q9H1C4 597 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 ZDHHC7Q9NXF8 308 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 NDE1Q9NXR1 346 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 DERAQ9Y315 318 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 A0A0J9YVX5 310 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 MED7O43513 233 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CKBP12277 381 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 KCNE1P15382 129 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 KDELR1P24390 212 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 ADORA2BP29275 332 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 GNL1P36915 607 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CCNFP41002 786 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 ELK3P41970 407 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 GPD2P43304 727 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 INCA1Q0VD86 236 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 HADHQ16836 314 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 GOLGA7BQ2TAP0 167 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 SLC26A11Q86WA9 606 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CCNJLQ8IV13 435 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 IGDCC3Q8IVU1 814 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 UNC45BQ8IWX7 931 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 ULK2Q8IYT8 1036 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 FNIP1Q8TF40 1166 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 NAT14Q8WUY8 206 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 KBTBD7Q8WVZ9 684 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 SRPK1Q96SB4 655 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CCDC106Q9BWC9 280 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 FRMD8Q9BZ67 464 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 RHBDL2Q9NX52 303 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 SIRPGQ9P1W8 387 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 ARMCX1Q9P291 453 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 SORCS3Q9UPU3 1222 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CHMP2BQ9UQN3 213 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 PLLPQ9Y342 182 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 C2orf71A6NGG8 1288 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 E5RJQ4 531 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 F8W810 466 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 H3BRJ5 948 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 HNRNPRO43390 633 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 PIAS1O75925 651 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 CD4P01730 458 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 ENO1P06733 434 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 VDRP11473 427 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 TAF6P49848 677 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 RPL26P61254 145 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 PDE1BQ01064 536 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 CYLC2Q14093 348 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 MBTPS1Q14703 1052 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 TAF5Q15542 800 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 XKR4Q5GH76 650 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 PMF1Q6P1K2 205 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 IZUMO2Q6UXV1 221 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 TTC30AQ86WT1 665 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 C3orf58Q8NDZ4 430 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 PPP1R10Q96QC0 940 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 HSFX1Q9UBD0 423 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 PPARGC1AQ9UBK2 798 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 SSX2IPQ9Y2D8 614 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 NR2E3Q9Y5X4 410 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 THSD7BQ9C0I4 1608 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 APOC4-APOC2K7ER74 178 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 BUD23O43709 281 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 APOC2P02655 101 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 C1QAP02745 245 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 THP07101 528 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 PFKMP08237 780 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 SNRPAP09012 282 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 UBTFL6P0CB48 400 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 KRT3P12035 628 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 STIP1P31948 543 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 ATN1P54259 1190 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 TRIM71Q2Q1W2 868 aaKnown RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 TEX44Q53QW1 395 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 RAB6CQ53S08 254 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 LGSNQ5TDP6 509 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 WSCD1Q658N2 575 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 OSTM1Q86WC4 334 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 SCUBE3Q8IX30 993 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 LRRC52Q8N7C0 313 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 APPL2Q8NEU8 664 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 E2F7Q96AV8 911 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 DEFB118Q96PH6 123 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 B3GNT5Q9BYG0 378 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 RAB6CQ9H0N0 254 aa10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 SAE1Q9UBE0 346 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3F-201ENST00000308521 KIAA0100Q14667 2235 aaKnown RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 TMEM247A6NEH6 219 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 KBTBD13C9JR72 458 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 CYB561D2O14569 222 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 TRDMT1O14717 391 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms