RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CDK5RAP1Q96SZ6 601 aaKnown RBP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 FMO2Q99518 471 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 LGMNQ99538 433 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 PRMT1Q99873 361 aaKnown RBP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 CERS4Q9HA82 394 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 NDFIP2Q9NV92 336 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 UXTQ9UBK9 157 aaPredicted RBP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 DNMT3LQ9UJW3 386 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 SSUH2Q9Y2M2 353 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 HBS1LQ9Y450 684 aaKnown RBP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 NCOR2Q9Y618 2525 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 SHROOM3Q8TF72 1996 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 NOTCH4Q99466 2003 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 GOLGA6L7A0A1B0GV03 622 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 H3BNC9 293 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CLASP2O75122 1294 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 LRG1P02750 347 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 EPCAMP16422 314 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ITIH2P19823 946 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 STIP1P31948 543 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CHKAP35790 457 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 HSPA9P38646 679 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CYP4F8P98187 520 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CALCOCO2Q13137 446 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 GPM6BQ13491 265 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 AUHQ13825 339 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 PRKD1Q15139 912 aaPredicted RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 RAP1GAP2Q684P5 730 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 HIBCHQ6NVY1 386 aaPredicted RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 RWDD4Q6NW29 188 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 HDXQ7Z353 690 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 TMC3Q7Z5M5 1100 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ITIH5Q86UX2 942 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CDKL3Q8IVW4 592 aaPredicted RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 MREGQ8N565 214 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 TAB3Q8N5C8 712 aaPredicted RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 MICAL1Q8TDZ2 1067 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ZFRQ96KR1 1074 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 PWWP2AQ96N64 755 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CYP2S1Q96SQ9 504 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 KLF16Q9BXK1 252 aaPredicted RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 PBX4Q9BYU1 374 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 TXLNGYQ9BZA5 131 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 PRDM12Q9H4Q4 367 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 MAN1C1Q9NR34 630 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 GKN1Q9NS71 199 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 TMEM51Q9NW97 253 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 MPP6Q9NZW5 540 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 VANGL2Q9ULK5 521 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 HPCAL4Q9UM19 191 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ASB3Q9Y575 518 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CHD7Q9P2D1 2997 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 HELZP42694 1942 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CFAP69A5D8W1 941 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 EPOPA6NHQ4 379 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 HACD1B0YJ81 288 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CCL16O15467 120 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ATP8B1O43520 1251 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 RFPL2O75678 378 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 STC2O76061 302 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CNTN5O94779 1100 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 KLKB1P03952 638 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 GABRR2P28476 465 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 HTR7P34969 479 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 PPP3CCP48454 512 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ZXDBP98169 803 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 UAP1Q16222 522 aaPredicted RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 FAM133BQ5BKY9 247 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 UBAP2Q5T6F2 1119 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 RNASEH2BQ5TBB1 312 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ANKRD22Q5VYY1 191 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 NUGGCQ68CJ6 796 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 TXNDC8Q6A555 127 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 FBXL22Q6P050 247 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ADGRD2Q7Z7M1 963 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 TADA2BQ86TJ2 420 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 NLRP14Q86W24 1093 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ARHGAP12Q8IWW6 846 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CCDC110Q8TBZ0 833 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CCHCR1Q8TD31 782 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 DEPDC1BQ8WUY9 529 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 TFB1MQ8WVM0 346 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 IGSF8Q969P0 613 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 CELF6Q96J87 481 aaKnown RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 SAMD11Q96NU1 681 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 FAM129AQ9BZQ8 928 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 NACA2Q9H009 215 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 TRPC7Q9HCX4 862 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 HCFC1R1Q9NWW0 138 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 ANAPC5Q9UJX4 755 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 FARP1Q9Y4F1 1045 aaPredicted RBP7.16□□□□□ -1.26
PTCD2-201ENST00000308077 MYO7AQ13402 2215 aa7.16□□□□□ -1.26
PTCD2-201ENST00000308077 PRUNE2Q8WUY3 3088 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 CHD9Q3L8U1 2897 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 IGLV3-10A0A075B6K4 115 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 TCRBV7S3A2A0A539 114 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 WASH4PA8MWX3 477 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 PER2O15055 1255 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 FGF10O15520 208 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms