RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CYTH4Q9UIA0 394 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 DMTF1Q9Y222 760 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 HBS1LQ9Y450 684 aaKnown RBP12.28□□□□□ -0.44
SMIM4-201ENST00000307106 PCDHGA8Q9Y5G5 932 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 CLIC4Q9Y696 253 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 RELNP78509 3460 aa12.28□□□□□ -0.44
SMIM4-201ENST00000307106 EDDM13A0A1B0GTR0 161 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 TTC34A8MYJ7 566 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 LATS1O95835 1130 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 ASS1P00966 412 aaKnown RBP12.27□□□□□ -0.45
SMIM4-201ENST00000307106 IL1BP01584 269 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 RPN1P04843 607 aaKnown RBP12.27□□□□□ -0.45
SMIM4-201ENST00000307106 ALPPL2P10696 532 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 NUDT1P36639 197 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 DUSP3P51452 185 aaPredicted RBP12.27□□□□□ -0.45
SMIM4-201ENST00000307106 POM121L1PQ3SYA9 428 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 ZACNQ401N2 412 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 KMT5BQ4FZB7 885 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 FAM26FQ5R3K3 315 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 MPP7Q5T2T1 576 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 RFWD3Q6PCD5 774 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 FOXR1Q6PIV2 292 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.27□□□□□ -0.45
SMIM4-201ENST00000307106 PIGZQ86VD9 579 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 MFN1Q8IWA4 741 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 STK40Q8N2I9 435 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 PDILTQ8N807 584 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 KDM1BQ8NB78 822 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 IFI44Q8TCB0 444 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 EXTL1Q92935 676 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 LMLNQ96KR4 655 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 TNMDQ9H2S6 317 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 IGSF5Q9NSI5 407 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 STIM2Q9P246 746 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 TFIP11Q9UBB9 837 aaKnown RBP12.27□□□□□ -0.45
SMIM4-201ENST00000307106 SEPT3Q9UH03 358 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 INTS6Q9UL03 887 aaKnown RBP12.27□□□□□ -0.45
SMIM4-201ENST00000307106 ERVW-1Q9UQF0 538 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 CA5BQ9Y2D0 317 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 ENTPD2Q9Y5L3 495 aa12.27□□□□□ -0.45
SMIM4-201ENST00000307106 SPTAN1Q13813 2472 aaKnown RBP12.26□□□□□ -0.45
SMIM4-201ENST00000307106 LY6G6EA0A0G2JKS1 128 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 PRAMEF26H0Y7S4 382 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 EFSO43281 561 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 PIAS2O75928 621 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
SMIM4-201ENST00000307106 THEGLP0DJG4 465 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 CD58P19256 250 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 TGM2P21980 687 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 MZF1P28698 734 aaPredicted RBP12.26□□□□□ -0.45
SMIM4-201ENST00000307106 DRD3P35462 400 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 PIK3CAP42336 1068 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 DLG4P78352 724 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 TLE1Q04724 770 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 KCNMA1Q12791 1236 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 SETMARQ53H47 684 aaPredicted RBP12.26□□□□□ -0.45
SMIM4-201ENST00000307106 RAB41Q5JT25 222 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 PIK3R6Q5UE93 754 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 USP53Q70EK8 1073 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 CLEC14AQ86T13 490 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 ARL14Q8N4G2 192 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 FIBINQ8TAL6 211 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 RNF139Q8WU17 664 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 NDRG1Q92597 394 aaKnown RBP12.26□□□□□ -0.45
SMIM4-201ENST00000307106 PTPRN2Q92932 1015 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 GRAMD1AQ96CP6 724 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 LRRC27Q9C0I9 530 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 KDM4CQ9H3R0 1056 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 CAAP1Q9H8G2 361 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 USP29Q9HBJ7 922 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 KLHL11Q9NVR0 708 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 NLGN3Q9NZ94 848 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 CGNQ9P2M7 1197 aaKnown RBP12.26□□□□□ -0.45
SMIM4-201ENST00000307106 ATXN7L1Q9ULK2 861 aaPredicted RBP12.26□□□□□ -0.45
SMIM4-201ENST00000307106 U3KQA8 63 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 ITIH6Q6UXX5 1313 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 LRRK1Q38SD2 2015 aa12.26□□□□□ -0.45
SMIM4-201ENST00000307106 UNC13CQ8NB66 2214 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 GOLGA6L7A0A1B0GV03 622 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 PMS2P1A4D2B8 440 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 NEMP2A6NFY4 417 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 SLC7A4O43246 635 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 MSI1O43347 362 aaKnown RBP12.25□□□□□ -0.45
SMIM4-201ENST00000307106 RTN2O75298 545 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 TNFSF15O95150 251 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 ITGB2P05107 769 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 SRPRAP08240 638 aaKnown RBP12.25□□□□□ -0.45
SMIM4-201ENST00000307106 FAM87AP0C7U9 286 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 SFTPCP11686 197 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 SLC6A4P31645 630 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 MLLT3P42568 568 aaPredicted RBP12.25□□□□□ -0.45
SMIM4-201ENST00000307106 CTSOP43234 321 aaPredicted RBP12.25□□□□□ -0.45
SMIM4-201ENST00000307106 TKTL1P51854 596 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 METAP1P53582 386 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 PM20D1Q6GTS8 502 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 SV2AQ7L0J3 742 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 TRIM69Q86WT6 500 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 EDEM1Q92611 657 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 FAM131CQ96AQ9 280 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 SGF29Q96ES7 293 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms